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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS10610 and RPSI07_RS10615 are separated by 348 nucleotides
RPSI07_RS10615 and RPSI07_RS10620 are separated by 312 nucleotides
RPSI07_RS10620 and RPSI07_RS10625 are separated by 19 nucleotides
RPSI07_RS10625 and RPSI07_RS10630 are separated by 145 nucleotides
RPSI07_RS10610: RPSI07_RS10610 - glucan biosynthesis protein D, at 583,593 to 585,119
_RS10610
RPSI07_RS10615: RPSI07_RS10615 - hypothetical protein, at 585,468 to 586,196
_RS10615
RPSI07_RS10620: RPSI07_RS10620 - UbiX family flavin prenyltransferase, at 586,509 to 587,165
_RS10620
RPSI07_RS10625: RPSI07_RS10625 - monothiol glutaredoxin, Grx4 family, at 587,185 to 587,496
_RS10625
RPSI07_RS10630: RPSI07_RS10630 - group II intron reverse transcriptase/maturase, at 587,642 to 589,339
_RS10630
Group
Condition
RPSI07
_RS10610
RPSI07
_RS10615
RPSI07
_RS10620
RPSI07
_RS10625
RPSI07
_RS10630
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.6
-4.3
N.D.
N.D.
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.8
-2.4
N.D.
N.D.
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.2
-3.1
N.D.
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.7
-2.3
N.D.
N.D.
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.4
-2.1
N.D.
N.D.
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.7
-1.9
N.D.
N.D.
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.2
-2.2
N.D.
N.D.
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-1.2
-1.1
N.D.
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.1
-2.6
N.D.
N.D.
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.6
-1.4
N.D.
N.D.
-0.2
xylem sap
Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap
-2.7
+0.3
N.D.
N.D.
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.7
-1.1
N.D.
N.D.
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
-0.4
-1.0
N.D.
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.6
-0.7
N.D.
N.D.
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.5
-1.6
N.D.
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix
+0.3
-1.2
N.D.
N.D.
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.2
+0.4
N.D.
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.8
+0.4
N.D.
N.D.
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.5
-1.2
N.D.
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.8
+0.4
N.D.
N.D.
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
+0.6
N.D.
N.D.
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.8
+1.3
N.D.
N.D.
-0.2
m63_quarter_strength
M63_quarter_strength
-0.5
+0.9
N.D.
N.D.
+0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+0.8
N.D.
N.D.
+0.1
cpg
CPG
-0.3
+0.8
N.D.
N.D.
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.2
+1.0
N.D.
N.D.
+0.2
m63_quarter_strength
M63_quarter_strength
+1.1
+0.1
N.D.
N.D.
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
+0.4
N.D.
N.D.
+0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.3
+0.6
N.D.
N.D.
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.4
+0.8
N.D.
N.D.
+0.5
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