Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10575 and RPSI07_RS10580 are separated by 0 nucleotidesRPSI07_RS10580 and RPSI07_RS10585 are separated by 137 nucleotidesRPSI07_RS10585 and RPSI07_RS10590 overlap by 4 nucleotidesRPSI07_RS10590 and RPSI07_RS10595 are separated by 25 nucleotides RPSI07_RS10575: RPSI07_RS10575 - cytochrome o ubiquinol oxidase subunit III, at 576,828 to 577,463 _RS10575 RPSI07_RS10580: RPSI07_RS10580 - cytochrome o ubiquinol oxidase subunit IV, at 577,464 to 577,829 _RS10580 RPSI07_RS10585: RPSI07_RS10585 - energy-dependent translational throttle protein EttA, at 577,967 to 579,634 _RS10585 RPSI07_RS10590: RPSI07_RS10590 - CDGSH iron-sulfur domain-containing protein, at 579,631 to 579,861 _RS10590 RPSI07_RS10595: RPSI07_RS10595 - aminoacyl-tRNA deacylase, at 579,887 to 580,375 _RS10595
Group Condition RPSI07_RS10575 RPSI07_RS10580 RPSI07_RS10585 RPSI07_RS10590 RPSI07_RS10595
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.9 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. N.D. -0.7 N.D. -0.2
cpg no stress control CPG no stress control N.D. N.D. -0.6 N.D. -0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.0 N.D. -0.7
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. -0.6 N.D. -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. -0.6 N.D. -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. -0.3 N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.5 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. -0.5 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.5 N.D. -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.5 N.D. -0.1
cpg CPG N.D. N.D. -0.5 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.5 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. -0.6 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix N.D. N.D. -0.7 N.D. +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.3 N.D. -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.5 N.D. -0.0
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. -0.4 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.5 N.D. +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.5 N.D. +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 N.D. +0.0
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. -0.5 N.D. +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.4 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.5 N.D. +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. -0.5 N.D. +0.3
m63_quarter_strength M63_quarter_strength N.D. N.D. -0.4 N.D. +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. +0.6 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. +0.9 N.D. -0.2
cpg CPG N.D. N.D. +0.8 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. +1.3 N.D. -0.2
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