Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10560 and RPSI07_RS10565 are separated by 575 nucleotidesRPSI07_RS10565 and RPSI07_RS10570 are separated by 9 nucleotidesRPSI07_RS10570 and RPSI07_RS10575 are separated by 3 nucleotidesRPSI07_RS10575 and RPSI07_RS10580 are separated by 0 nucleotides RPSI07_RS10560: RPSI07_RS10560 - RNA polymerase sigma factor, at 572,716 to 573,273 _RS10560 RPSI07_RS10565: RPSI07_RS10565 - ubiquinol oxidase subunit II, at 573,849 to 574,835 _RS10565 RPSI07_RS10570: RPSI07_RS10570 - cytochrome o ubiquinol oxidase subunit I, at 574,845 to 576,824 _RS10570 RPSI07_RS10575: RPSI07_RS10575 - cytochrome o ubiquinol oxidase subunit III, at 576,828 to 577,463 _RS10575 RPSI07_RS10580: RPSI07_RS10580 - cytochrome o ubiquinol oxidase subunit IV, at 577,464 to 577,829 _RS10580
Group Condition RPSI07_RS10560 RPSI07_RS10565 RPSI07_RS10570 RPSI07_RS10575 RPSI07_RS10580
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -2.6 -2.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.5 -2.3 -0.9 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -1.8 -2.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.6 -1.8 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 -1.7 -1.8 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.6 -0.9 -2.0 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 -0.8 -2.2 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.3 -1.2 -1.5 N.D. N.D.
cpg CPG -0.2 -1.5 -1.0 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.4 -1.2 -1.0 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -1.8 -0.9 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 -1.0 -1.5 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 -1.9 -0.6 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.8 -1.0 N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.0 -0.8 -1.5 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.5 -1.7 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.3 -1.3 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 -1.2 -1.0 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.7 -1.4 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.3 -0.3 -1.6 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 -1.2 -0.9 N.D. N.D.
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.5 -1.8 -0.8 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 -0.2 -1.9 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.1 -1.0 -1.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -1.8 -0.8 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.3 -1.5 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.3 -1.0 -0.8 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.3 -0.6 -1.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.4 -0.4 -1.3 N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 +0.7 -1.5 N.D. N.D.
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RPSI07_RS10560
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RPSI07_RS10565
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RPSI07_RS10575
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RPSI07_RS10580
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