Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10510 and RPSI07_RS10515 are separated by 26 nucleotidesRPSI07_RS10515 and RPSI07_RS10520 are separated by 145 nucleotidesRPSI07_RS10520 and RPSI07_RS10525 are separated by 58 nucleotidesRPSI07_RS10525 and RPSI07_RS10530 are separated by 30 nucleotides RPSI07_RS10510: RPSI07_RS10510 - cytochrome b, at 559,554 to 560,957 _RS10510 RPSI07_RS10515: RPSI07_RS10515 - cytochrome c, at 560,984 to 561,730 _RS10515 RPSI07_RS10520: RPSI07_RS10520 - transcription modulator protein, at 561,876 to 562,487 _RS10520 RPSI07_RS10525: RPSI07_RS10525 - ClpXP protease specificity-enhancing factor, at 562,546 to 563,043 _RS10525 RPSI07_RS10530: RPSI07_RS10530 - tRNA-Thr, at 563,074 to 563,149 _RS10530
Group Condition RPSI07_RS10510 RPSI07_RS10515 RPSI07_RS10520 RPSI07_RS10525 RPSI07_RS10530
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -5.0 -4.8 N.D. +0.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -5.2 -4.1 N.D. +0.0 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.6 -4.1 N.D. -0.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.7 -4.3 N.D. -0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.6 -3.7 N.D. +0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.2 -3.6 N.D. +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.3 -0.6 N.D. -1.2 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -0.7 N.D. -2.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.6 -0.7 N.D. -0.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.5 -0.7 N.D. -1.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.1 -1.0 N.D. -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 -0.9 N.D. -0.3 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -0.4 N.D. -1.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 +0.2 N.D. -1.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -1.1 -1.2 N.D. -0.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.3 -1.0 N.D. +0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.6 -0.5 N.D. -0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.4 -0.8 N.D. -0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -1.1 -0.9 N.D. -0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.9 -0.5 N.D. -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 -0.2 N.D. -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -1.2 -0.1 N.D. -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 +0.3 N.D. -0.9 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.4 -0.4 N.D. +0.3 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 -0.1 N.D. -1.5 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +0.3 N.D. -2.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 +0.1 N.D. +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.9 -0.4 N.D. +0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix -1.1 -0.2 N.D. +0.9 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.1 -0.0 N.D. -1.1 N.D.
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RPSI07_RS10510
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RPSI07_RS10515
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RPSI07_RS10525
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RPSI07_RS10530
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