Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10500 and RPSI07_RS10505 are separated by 245 nucleotidesRPSI07_RS10505 and RPSI07_RS10510 are separated by 2 nucleotidesRPSI07_RS10510 and RPSI07_RS10515 are separated by 26 nucleotidesRPSI07_RS10515 and RPSI07_RS10520 are separated by 145 nucleotides RPSI07_RS10500: RPSI07_RS10500 - large conductance mechanosensitive channel protein MscL, at 558,272 to 558,697 _RS10500 RPSI07_RS10505: RPSI07_RS10505 - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 558,943 to 559,551 _RS10505 RPSI07_RS10510: RPSI07_RS10510 - cytochrome b, at 559,554 to 560,957 _RS10510 RPSI07_RS10515: RPSI07_RS10515 - cytochrome c, at 560,984 to 561,730 _RS10515 RPSI07_RS10520: RPSI07_RS10520 - transcription modulator protein, at 561,876 to 562,487 _RS10520
Group Condition RPSI07_RS10500 RPSI07_RS10505 RPSI07_RS10510 RPSI07_RS10515 RPSI07_RS10520
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 N.D. -5.0 -4.8 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 N.D. -5.2 -4.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 N.D. -4.6 -4.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 N.D. -3.7 -4.3 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 N.D. -3.6 -3.7 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 N.D. -3.2 -3.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 N.D. -2.3 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. -1.4 -0.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. -1.6 -0.7 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 N.D. -1.1 -1.2 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.0 N.D. -1.3 -1.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -1.2 N.D. -0.4 -0.5 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -1.5 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 N.D. -1.1 -1.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 N.D. -1.6 -0.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 N.D. -1.4 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.3 N.D. +0.5 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +1.5 N.D. -1.1 -0.9 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.2 N.D. +1.1 -0.0 N.D.
smsa no antibiotic control SMSA no antibiotic control +1.5 N.D. -0.9 -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +1.2 N.D. -1.1 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +1.4 N.D. -1.2 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.4 N.D. -0.4 -0.8 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +1.5 N.D. -0.8 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +1.5 N.D. -0.9 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix +1.6 N.D. -1.1 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +1.4 N.D. -0.7 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +1.5 N.D. -0.9 +0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +1.5 N.D. -0.7 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +1.5 N.D. -0.1 +0.2 N.D.
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