Fitness for 5 genes in Ralstonia solanacearum PSI07

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 81 experiments or choose conditions or try the comparative fitness browser

500 ntRPSI07_RS10480 and RPSI07_RS10485 are separated by 336 nucleotidesRPSI07_RS10485 and RPSI07_RS10490 are separated by 418 nucleotidesRPSI07_RS10490 and RPSI07_RS10495 are separated by 19 nucleotidesRPSI07_RS10495 and RPSI07_RS10500 are separated by 12 nucleotides RPSI07_RS10480: RPSI07_RS10480 - iron ABC transporter substrate-binding protein, at 553,254 to 554,396 _RS10480 RPSI07_RS10485: RPSI07_RS10485 - porin, at 554,733 to 555,860 _RS10485 RPSI07_RS10490: RPSI07_RS10490 - PDZ domain-containing protein, at 556,279 to 557,493 _RS10490 RPSI07_RS10495: RPSI07_RS10495 - Nif3-like dinuclear metal center hexameric protein, at 557,513 to 558,259 _RS10495 RPSI07_RS10500: RPSI07_RS10500 - large conductance mechanosensitive channel protein MscL, at 558,272 to 558,697 _RS10500
Group Condition RPSI07_RS10480 RPSI07_RS10485 RPSI07_RS10490 RPSI07_RS10495 RPSI07_RS10500
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.5 N.D. -0.6 -0.1 -1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.2 N.D. -1.0 -0.2 -0.2
m63_quarter_strength M63_quarter_strength +0.1 N.D. -0.5 -0.1 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.2 N.D. +0.6 -0.2 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 N.D. +0.5 +0.0 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.2 N.D. +0.1 +0.2 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.3 N.D. +0.5 +0.1 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.2 N.D. +0.7 -0.0 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.3 N.D. +0.7 -0.0 -0.9
cpg no stress control CPG no stress control -0.4 N.D. +0.9 +0.1 -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 N.D. -0.9 -0.6 +1.2
stress SMSA with Ralstonia_antibiotic_mix -0.2 N.D. +0.9 +0.0 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.1 N.D. +1.1 +0.2 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.1 N.D. +1.4 +0.0 -1.3
smsa no antibiotic control SMSA no antibiotic control -0.1 N.D. +1.2 +0.0 -1.1
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.0 N.D. +0.4 -0.8 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.1 N.D. +1.1 +0.2 -1.1
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.0 N.D. +0.7 +0.7 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.0 N.D. -0.8 -0.1 +1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.1 N.D. -0.4 -0.2 +1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 N.D. +0.9 +0.5 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.3 N.D. -0.1 -0.4 +1.4
stress SMSA with Ralstonia_antibiotic_mix +0.3 N.D. -0.5 -0.1 +1.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.0 N.D. -0.4 +0.3 +1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 N.D. -0.4 +0.2 +1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.1 N.D. +0.2 -0.1 +1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 N.D. +0.2 +0.0 +1.5
smsa no antibiotic control SMSA no antibiotic control +0.0 N.D. -0.1 +0.1 +1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 N.D. +0.0 +0.2 +1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 N.D. +0.2 +0.2 +1.5
remove
RPSI07_RS10480
plot
remove
RPSI07_RS10485
plot
remove
RPSI07_RS10490
remove
RPSI07_RS10495
plot
remove
RPSI07_RS10500
plot