Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10345 and RPSI07_RS10350 are separated by 3 nucleotidesRPSI07_RS10350 and RPSI07_RS10355 are separated by 154 nucleotidesRPSI07_RS10355 and RPSI07_RS10360 are separated by 65 nucleotidesRPSI07_RS10360 and RPSI07_RS10365 are separated by 236 nucleotides RPSI07_RS10345: RPSI07_RS10345 - outer membrane lipid asymmetry maintenance protein MlaD, at 530,908 to 531,426 _RS10345 RPSI07_RS10350: RPSI07_RS10350 - ABC transporter, at 531,430 to 532,239 _RS10350 RPSI07_RS10355: RPSI07_RS10355 - hypothetical protein, at 532,394 to 533,029 _RS10355 RPSI07_RS10360: RPSI07_RS10360 - STAS domain-containing protein, at 533,095 to 533,409 _RS10360 RPSI07_RS10365: RPSI07_RS10365 - ABC transporter ATP-binding protein, at 533,646 to 534,611 _RS10365
Group Condition RPSI07_RS10345 RPSI07_RS10350 RPSI07_RS10355 RPSI07_RS10360 RPSI07_RS10365
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -4.3 -4.2 -1.8 -4.0 -0.1
stress SMSA with Ralstonia_antibiotic_mix -4.2 -4.5 -1.8 -2.9 -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -3.0 -3.7 -1.9 -4.6 -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -3.2 -4.1 -1.7 -4.4 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -2.9 -3.5 -0.7 -4.5 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -3.3 -3.8 -1.7 -3.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -3.3 -3.7 -1.7 -3.4 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.7 -2.3 -2.9 -1.6 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -3.9 -1.5 -2.4 -3.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -3.8 -1.8 -2.3 -2.7 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -2.6 -3.1 -0.1 -4.5 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -3.4 -3.1 +0.1 -3.3 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -2.7 -3.0 +0.0 -4.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -3.2 -2.0 -1.7 -3.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -3.0 -1.7 -2.2 -2.6 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.7 -3.7 -0.0 -4.5 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -3.4 -3.2 +0.0 -2.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix -2.3 -2.4 -2.4 -1.9 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -3.2 -1.5 -1.7 -2.2 +0.0
stress SMSA with Ralstonia_antibiotic_mix -3.4 -3.0 +0.0 -1.8 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.9 -2.2 -2.3 -1.5 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -1.9 -2.8 +0.0 -3.8 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -2.6 -1.6 -2.2 -1.6 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 -1.4 -4.8 -0.8 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.2 -1.1 -3.3 -0.8 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.2 -1.2 -2.7 -0.7 +0.4
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -4.0 -1.6 +0.9 -0.6 -0.8
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.8 -0.9 -4.2 -0.9 +0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.8 -0.9 +3.8 +0.2 -0.7
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.6 -0.3 +2.9 -2.5 +1.3
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