Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10220 and RPSI07_RS10225 are separated by 102 nucleotidesRPSI07_RS10225 and RPSI07_RS10230 are separated by 24 nucleotidesRPSI07_RS10230 and RPSI07_RS10235 are separated by 8 nucleotidesRPSI07_RS10235 and RPSI07_RS10240 are separated by 96 nucleotides RPSI07_RS10220: RPSI07_RS10220 - c-type cytochrome biogenesis protein CcsB, at 501,446 to 502,633 _RS10220 RPSI07_RS10225: RPSI07_RS10225 - hypothetical protein, at 502,736 to 503,167 _RS10225 RPSI07_RS10230: RPSI07_RS10230 - RNA polymerase sigma factor, at 503,192 to 503,725 _RS10230 RPSI07_RS10235: RPSI07_RS10235 - membrane protein, at 503,734 to 504,594 _RS10235 RPSI07_RS10240: RPSI07_RS10240 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 504,691 to 505,686 _RS10240
Group Condition RPSI07_RS10220 RPSI07_RS10225 RPSI07_RS10230 RPSI07_RS10235 RPSI07_RS10240
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.8 +0.6 N.D. -2.7 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.7 -0.3 N.D. -2.2 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.1 +0.5 N.D. -1.3 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -0.3 N.D. -0.6 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.6 N.D. -1.3 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.8 +0.5 N.D. -1.5 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 +0.2 N.D. -1.2 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 +0.6 N.D. -1.5 -0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.4 +0.4 N.D. -1.3 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.3 N.D. -1.2 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 +0.4 N.D. -1.2 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 +0.3 N.D. -0.8 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.7 +0.2 N.D. -0.8 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.6 +0.2 N.D. -0.7 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 +0.5 N.D. -0.9 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.7 N.D. +0.5 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.0 +0.6 N.D. -0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -1.2 +0.3 N.D. +0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.4 +0.5 N.D. +0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.4 +0.4 N.D. -0.8 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 -0.1 N.D. +0.8 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 +0.2 N.D. +0.9 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.9 -0.1 N.D. +1.4 +0.1
m63_quarter_strength M63_quarter_strength +0.6 -0.5 N.D. +1.0 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 +0.7 N.D. +1.5 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +1.3 -0.2 N.D. +0.1 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.6 +0.7 N.D. +0.7 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +1.5 +0.7 N.D. +0.5 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +1.9 +0.2 N.D. +0.6 +0.0
m63_quarter_strength M63_quarter_strength +1.1 +2.3 N.D. +0.7 +0.4
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