Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS10175 and RPSI07_RS10180 are separated by 241 nucleotidesRPSI07_RS10180 and RPSI07_RS10185 are separated by 138 nucleotidesRPSI07_RS10185 and RPSI07_RS10190 are separated by 157 nucleotidesRPSI07_RS10190 and RPSI07_RS10195 are separated by 18 nucleotides RPSI07_RS10175: RPSI07_RS10175 - 30S ribosomal protein S4, at 491,640 to 492,263 _RS10175 RPSI07_RS10180: RPSI07_RS10180 - DNA-directed RNA polymerase subunit alpha, at 492,505 to 493,485 _RS10180 RPSI07_RS10185: RPSI07_RS10185 - 50S ribosomal protein L17, at 493,624 to 494,022 _RS10185 RPSI07_RS10190: RPSI07_RS10190 - divalent-cation tolerance protein CutA, at 494,180 to 494,518 _RS10190 RPSI07_RS10195: RPSI07_RS10195 - protein-disulfide reductase DsbD, at 494,537 to 496,366 _RS10195
Group Condition RPSI07_RS10175 RPSI07_RS10180 RPSI07_RS10185 RPSI07_RS10190 RPSI07_RS10195
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. +0.4 -3.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. -0.3 -2.8
cpg CPG N.D. N.D. N.D. -0.3 -2.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. -0.7 -2.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.1 -2.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.8 -1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. N.D. N.D. -0.1 -2.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. N.D. -0.7 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol N.D. N.D. N.D. -0.6 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. N.D. -0.0 -1.7
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. N.D. -0.2 -1.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. -0.7 -0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. -0.6 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -1.1 -0.1
cpg CPG N.D. N.D. N.D. +0.4 -0.9
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap N.D. N.D. N.D. +1.0 -0.8
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. +1.4 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.3 +1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. -0.3 +1.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. N.D. -0.3 +1.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.4 +1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.8 +2.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. +0.1 +1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. N.D. +0.2 +1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. N.D. +0.2 +1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. N.D. N.D. +0.4 +1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.3 +2.2
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. N.D. +0.2 +1.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. N.D. +0.1 +2.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. +1.0 +2.9
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RPSI07_RS10175
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RPSI07_RS10180
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RPSI07_RS10195
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