Fitness for 5 genes in Ralstonia solanacearum PSI07

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RPSI07_RS08710	RPSI07_RS08715	RPSI07_RS08720	RPSI07_RS08725	RPSI07_RS08730
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-1.9	-0.6	N.D.	-2.8	-1.8
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.0	-1.0	N.D.	-0.9	-1.9
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	+0.2	-0.4	N.D.	-2.3	-0.0
xylem sap	Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap	-0.9	+0.1	N.D.	-1.8	+0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	-0.3	-0.5	N.D.	-1.4	+0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	+0.3	-0.3	N.D.	-1.5	-0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	-0.6	-0.3	N.D.	-1.1	+0.3
cpg no stress control	CPG no stress control	-0.4	-0.4	N.D.	-1.2	+0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	+0.5	-0.3	N.D.	-1.5	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.6	-0.0	N.D.	-1.9	+0.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	+1.0	-0.3	N.D.	-1.7	+0.1
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.9	-0.3	N.D.	-0.5	+1.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.6	+0.4	N.D.	-1.0	-0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	-1.2	+0.2	N.D.	+0.7	-0.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	+0.6	-0.0	N.D.	-1.1	+0.6
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	+1.1	-0.0	N.D.	-1.3	+0.4
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.4	+0.1	N.D.	+1.4	-0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	-0.3	-0.3	N.D.	+1.5	-0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	-0.6	+0.3	N.D.	+1.5	-0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.3	+0.4	N.D.	+1.4	-1.2
smsa no antibiotic control	SMSA no antibiotic control	-1.2	+0.4	N.D.	+1.7	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.7	+0.1	N.D.	+1.6	+0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.3	-0.1	N.D.	+2.1	-0.4
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.3	+0.3	N.D.	+1.7	-0.1
cpg no stress control	CPG no stress control	+0.7	-0.3	N.D.	+0.8	+0.4
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+1.3	-0.1	N.D.	+0.9	-0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	-0.0	+1.1	N.D.	+1.2	+0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	-0.1	+0.7	N.D.	+1.7	+0.4
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.8	+0.2	N.D.	+2.7	-0.3
m63_quarter_strength	M63_quarter_strength	+0.7	-0.2	N.D.	+2.2	+0.7