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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS08415 and RPSI07_RS08420 are separated by 40 nucleotides
RPSI07_RS08420 and RPSI07_RS08425 are separated by 26 nucleotides
RPSI07_RS08425 and RPSI07_RS08430 are separated by 348 nucleotides
RPSI07_RS08430 and RPSI07_RS08435 are separated by 232 nucleotides
RPSI07_RS08415: RPSI07_RS08415 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 122,842 to 123,513
_RS08415
RPSI07_RS08420: RPSI07_RS08420 - ParA family protein, at 123,554 to 124,339
_RS08420
RPSI07_RS08425: RPSI07_RS08425 - chromosome partitioning protein ParB, at 124,366 to 125,277
_RS08425
RPSI07_RS08430: RPSI07_RS08430 - ATP synthase subunit I, at 125,626 to 126,204
_RS08430
RPSI07_RS08435: RPSI07_RS08435 - F0F1 ATP synthase subunit A, at 126,437 to 127,318
_RS08435
Group
Condition
RPSI07
_RS08415
RPSI07
_RS08420
RPSI07
_RS08425
RPSI07
_RS08430
RPSI07
_RS08435
xylem sap
Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap
-1.9
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-1.8
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-1.8
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-1.8
N.D.
N.D.
N.D.
N.D.
cpg no stress control
CPG no stress control
-1.7
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.2
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-1.2
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-1.1
N.D.
N.D.
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
-1.1
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-1.1
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.0
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.9
N.D.
N.D.
N.D.
N.D.
smsa no antibiotic control
SMSA no antibiotic control
-0.9
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.9
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.9
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.8
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix
-0.8
N.D.
N.D.
N.D.
N.D.
cpg
CPG
-0.7
N.D.
N.D.
N.D.
N.D.
cpg no stress control
CPG no stress control
-0.7
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.6
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.6
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.6
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.9
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.1
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+1.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+1.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+1.5
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+1.6
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+2.2
N.D.
N.D.
N.D.
N.D.
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