Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS08315 and RPSI07_RS08320 are separated by 58 nucleotidesRPSI07_RS08320 and RPSI07_RS08325 are separated by 68 nucleotidesRPSI07_RS08325 and RPSI07_RS08330 are separated by 221 nucleotidesRPSI07_RS08330 and RPSI07_RS08335 are separated by 92 nucleotides RPSI07_RS08315: RPSI07_RS08315 - Cu(I)-responsive transcriptional regulator, at 104,262 to 104,738 _RS08315 RPSI07_RS08320: RPSI07_RS08320 - alpha/beta hydrolase, at 104,797 to 105,657 _RS08320 RPSI07_RS08325: RPSI07_RS08325 - choline dehydrogenase, at 105,726 to 107,360 _RS08325 RPSI07_RS08330: RPSI07_RS08330 - ABC transporter ATP-binding protein, at 107,582 to 108,352 _RS08330 RPSI07_RS08335: RPSI07_RS08335 - ABC transporter ATP-binding protein, at 108,445 to 109,185 _RS08335
Group Condition RPSI07_RS08315 RPSI07_RS08320 RPSI07_RS08325 RPSI07_RS08330 RPSI07_RS08335
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.1 +0.3 -2.2 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 -1.1 +0.0 -0.2 -0.3
m63_quarter_strength M63_quarter_strength -0.4 -0.7 +0.1 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix -0.3 +0.3 -0.6 -0.6 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.8 +0.1 -0.4 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 +0.3 +0.2 -1.3 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.0 +0.0 -0.1 -1.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.6 -0.1 +0.3 -1.6 +0.0
cpg no stress control CPG no stress control -0.4 +0.1 -0.2 -0.7 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.3 -0.5 +0.1 -0.6 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.5 -0.3 -0.3 -0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.5 -0.4 +0.2 -0.9 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.4 +0.2 -0.2 -0.3 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.4 +0.7 -0.2 -0.4 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.8 -0.3 -0.1 -0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.6 -0.1 +0.0 -0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.5 +0.3 -0.3 +0.4 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 +0.5 -0.0 -0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.9 +0.0 +0.1 -0.6 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.3 +0.6 -0.3 -0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.5 +0.2 +0.1 -0.5 +0.3
smsa no antibiotic control SMSA no antibiotic control +0.5 -0.0 +0.2 -0.4 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 +0.7 -0.3 -0.3 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.6 +0.1 +0.2 -0.3 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 +0.8 +0.0 -0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 -0.2 +0.2 +0.5 +0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.3 +1.0 -0.5 +0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.0 +0.3 +0.4 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +0.9 -0.3 +0.5 +0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 -0.1 +0.9 +2.1 +0.1
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