Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS08185 and RPSI07_RS08190 are separated by 31 nucleotidesRPSI07_RS08190 and RPSI07_RS08195 are separated by 240 nucleotidesRPSI07_RS08195 and RPSI07_RS08200 are separated by 192 nucleotidesRPSI07_RS08200 and RPSI07_RS08205 are separated by 10 nucleotides RPSI07_RS08185: RPSI07_RS08185 - nitrate ABC transporter ATP-binding protein, at 77,631 to 78,983 _RS08185 RPSI07_RS08190: RPSI07_RS08190 - sulfonate ABC transporter permease, at 79,015 to 80,775 _RS08190 RPSI07_RS08195: RPSI07_RS08195 - acylphosphatase, at 81,016 to 81,303 _RS08195 RPSI07_RS08200: RPSI07_RS08200 - hypothetical protein, at 81,496 to 82,770 _RS08200 RPSI07_RS08205: RPSI07_RS08205 - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ, at 82,781 to 83,638 _RS08205
Group Condition RPSI07_RS08185 RPSI07_RS08190 RPSI07_RS08195 RPSI07_RS08200 RPSI07_RS08205
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.1 -1.6 -0.0 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -1.3 -0.5 -0.2 +0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.4 -0.5 +0.0 -0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix -1.2 -0.3 +0.3 -0.3 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.9 -0.3 -0.1 -0.3 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.5 -0.1 -0.5 +0.3 -0.4
smsa no antibiotic control SMSA no antibiotic control -1.0 -0.4 +0.1 +0.0 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.1 +0.8 -0.2 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.0 -0.3 +0.3 -0.2 +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -1.1 -0.7 +1.1 -0.1 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.4 +0.3 +0.0 -0.7
cpg CPG -0.7 -0.4 +0.8 +0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -0.2 +0.7 +0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.4 +0.7 +0.7 -0.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.9 -0.2 +0.3 +0.3 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.7 -0.1 +0.5 +0.3 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.0 +0.7 +0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix +0.8 +0.2 -0.5 +0.1 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.0 +0.9 +0.1 -0.5
smsa no antibiotic control SMSA no antibiotic control +0.8 +0.3 -0.3 +0.1 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.4 +1.1 +0.1 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +1.2 +0.2 -0.5 -0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.9 +0.6 -0.4 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.7 +0.2 -0.1 +0.5 -0.2
m63_quarter_strength M63_quarter_strength -0.2 +0.3 +0.7 -0.2 +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.7 -0.1 -0.0 +0.3 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.3 +0.1 -0.0 +1.7
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 -0.2 +0.9 +0.4 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +1.8 +0.2 -0.0 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +1.6 +0.3 -0.8 +0.1 +1.0
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RPSI07_RS08185
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