Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS08045 and RPSI07_RS08050 are separated by 34 nucleotidesRPSI07_RS08050 and RPSI07_RS08055 overlap by 25 nucleotidesRPSI07_RS08055 and RPSI07_RS08060 are separated by 98 nucleotidesRPSI07_RS08060 and RPSI07_RS08065 are separated by 221 nucleotides RPSI07_RS08045: RPSI07_RS08045 - membrane protein, at 43,278 to 44,063 _RS08045 RPSI07_RS08050: RPSI07_RS08050 - DNA-binding response regulator, at 44,098 to 44,763 _RS08050 RPSI07_RS08055: RPSI07_RS08055 - two-component sensor histidine kinase, at 44,739 to 46,079 _RS08055 RPSI07_RS08060: RPSI07_RS08060 - CPBP family intramembrane metalloprotease, at 46,178 to 47,002 _RS08060 RPSI07_RS08065: RPSI07_RS08065 - MFS transporter, at 47,224 to 48,495 _RS08065
Group Condition RPSI07_RS08045 RPSI07_RS08050 RPSI07_RS08055 RPSI07_RS08060 RPSI07_RS08065
stress SMSA with Ralstonia_antibiotic_mix -0.2 -0.2 -0.4 -0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 -0.3 -0.3 +0.2 -0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.5 -0.0 -0.2 +0.0
stress SMSA with Ralstonia_antibiotic_mix -0.3 -0.1 -0.2 -0.0 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 -0.4 -0.2 +0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.3 -0.2 +0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.0 -0.0 +0.2 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 -0.2 -0.2 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.2 -0.2 +0.2 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 -0.1 -0.1 -0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.3 -0.2 -0.1 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 -0.1 -0.3 +0.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.3 -0.0 -0.3 +0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.7 -0.1 +0.3 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.1 -0.3 +0.1 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 -0.3 -0.1 +0.2 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.4 +0.2 +0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.3 +0.1 -0.2 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.2 -0.2 -0.3 +0.3 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 -0.4 +0.1 +0.4 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.2 +0.1 +0.4 +0.0
m63_quarter_strength M63_quarter_strength -0.0 -0.2 +0.2 +0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 -0.1 +0.2 +0.3 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.4 +0.1 +0.1 -0.1 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.3 +0.2 +0.2 -0.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.0 +0.3 +0.4 -0.0
m63_quarter_strength M63_quarter_strength +0.0 +0.4 +0.3 -0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.2 +0.1 +0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.2 +0.1 +0.1 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 +0.6 +0.0 +0.6 +0.1
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