Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS07795 and RPSI07_RS07800 are separated by 96 nucleotidesRPSI07_RS07800 and RPSI07_RS07805 are separated by 45 nucleotidesRPSI07_RS07805 and RPSI07_RS07810 are separated by 124 nucleotidesRPSI07_RS07810 and RPSI07_RS07815 are separated by 371 nucleotides RPSI07_RS07795: RPSI07_RS07795 - acyl-CoA desaturase, at 2,062,855 to 2,063,781 _RS07795 RPSI07_RS07800: RPSI07_RS07800 - patatin, at 2,063,878 to 2,064,741 _RS07800 RPSI07_RS07805: RPSI07_RS07805 - alpha/beta hydrolase, at 2,064,787 to 2,065,680 _RS07805 RPSI07_RS07810: RPSI07_RS07810 - peptide chain release factor 3, at 2,065,805 to 2,067,400 _RS07810 RPSI07_RS07815: RPSI07_RS07815 - hypothetical protein, at 2,067,772 to 2,067,999 _RS07815
Group Condition RPSI07_RS07795 RPSI07_RS07800 RPSI07_RS07805 RPSI07_RS07810 RPSI07_RS07815
cpg CPG -0.1 N.D. -2.2 -0.5 N.D.
smsa no antibiotic control SMSA no antibiotic control +0.4 N.D. -2.0 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.3 N.D. -1.9 -0.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 N.D. -1.1 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 N.D. -1.1 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.4 N.D. -1.9 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.3 N.D. -1.7 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.2 N.D. -1.5 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 N.D. -1.4 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.3 N.D. -1.4 -0.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.2 N.D. -1.3 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.9 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.5 N.D. -1.7 +0.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 N.D. -0.8 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.5 N.D. -1.5 +0.1 N.D.
smsa no antibiotic control SMSA no antibiotic control -0.5 N.D. +0.5 -0.7 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 N.D. -0.4 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.5 N.D. +0.6 -0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 N.D. -1.1 +0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.5 N.D. -1.1 +0.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.5 N.D. -0.8 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.7 N.D. +0.9 -0.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 N.D. +0.9 -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.1 N.D. +0.5 -0.9 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 N.D. +0.6 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.2 N.D. +1.0 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.7 N.D. -0.5 +0.0 N.D.
cpg no stress control CPG no stress control -0.3 N.D. +0.8 -0.2 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.2 N.D. +0.4 -0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.9 N.D. +0.1 +0.3 N.D.
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RPSI07_RS07795
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RPSI07_RS07800
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RPSI07_RS07810
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RPSI07_RS07815
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