Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS07425 and RPSI07_RS07430 are separated by 289 nucleotidesRPSI07_RS07430 and RPSI07_RS07435 are separated by 18 nucleotidesRPSI07_RS07435 and RPSI07_RS07440 are separated by 67 nucleotidesRPSI07_RS07440 and RPSI07_RS07445 are separated by 463 nucleotides RPSI07_RS07425: RPSI07_RS07425 - aminotransferase class V-fold PLP-dependent enzyme, at 1,966,529 to 1,967,764 _RS07425 RPSI07_RS07430: RPSI07_RS07430 - FAD-binding oxidoreductase, at 1,968,054 to 1,969,250 _RS07430 RPSI07_RS07435: RPSI07_RS07435 - aldehyde dehydrogenase family protein, at 1,969,269 to 1,970,783 _RS07435 RPSI07_RS07440: RPSI07_RS07440 - branched-chain amino acid ABC transporter substrate-binding protein, at 1,970,851 to 1,971,993 _RS07440 RPSI07_RS07445: RPSI07_RS07445 - LysR family transcriptional regulator, at 1,972,457 to 1,973,347 _RS07445
Group Condition RPSI07_RS07425 RPSI07_RS07430 RPSI07_RS07435 RPSI07_RS07440 RPSI07_RS07445
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.7 +0.1 +0.1 -0.2 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -4.9 +0.1 +0.1 +0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -4.8 +0.1 +0.2 +0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.5 +0.2 +0.0 +0.0 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -4.4 +0.1 -0.1 +0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.9 +0.0 +0.1 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.4 +0.2 +0.1 +0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.9 +0.5 +0.3 -0.1 +0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.8 +0.1 -0.1 +0.2 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -4.4 +0.5 +0.4 -0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -4.2 +0.6 +0.5 -0.3 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.9 +0.1 +0.2 +0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.3 +0.4 +0.2 +0.1 +0.4
m63_quarter_strength M63_quarter_strength -3.4 +0.1 +0.0 -0.0 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.5 +0.2 +0.0 +0.0 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.3 +0.2 +0.1 +0.1 -0.0
m63_quarter_strength M63_quarter_strength -2.9 -0.0 +0.2 +0.1 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.9 +0.5 +0.1 -0.3 +0.1
m63_quarter_strength M63_quarter_strength -2.9 +0.4 +0.4 -0.0 +0.3
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -1.6 +0.2 -0.1 -0.1 -0.2
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -1.6 +0.2 -0.1 -0.1 -0.1
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -1.3 -0.2 -0.2 +0.0 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 +0.2 +0.2 -0.1 +0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.0 +0.1 +0.3 -0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.0 +0.4 +0.1 -0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.1 +0.4 +0.1 -0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix -0.0 +0.3 +0.1 -0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.1 +0.1 +0.1 +0.2 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.1 +0.2 +0.1 +0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 +0.2 +0.1 -0.1 +0.7
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RPSI07_RS07425
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RPSI07_RS07430
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RPSI07_RS07440
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RPSI07_RS07445
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