Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS06920 and RPSI07_RS24695 overlap by 35 nucleotidesRPSI07_RS24695 and RPSI07_RS06925 overlap by 22 nucleotidesRPSI07_RS06925 and RPSI07_RS06930 overlap by 1 nucleotidesRPSI07_RS06930 and RPSI07_RS06935 overlap by 4 nucleotides RPSI07_RS06920: RPSI07_RS06920 - N-acetyltransferase, at 1,842,892 to 1,843,365 _RS06920 RPSI07_RS24695: RPSI07_RS24695 - hypothetical protein, at 1,843,331 to 1,843,747 _RS24695 RPSI07_RS06925: RPSI07_RS06925 - siderophore biosynthesis protein, at 1,843,726 to 1,845,108 _RS06925 RPSI07_RS06930: RPSI07_RS06930 - methionine--tRNA ligase, at 1,845,108 to 1,846,598 _RS06930 RPSI07_RS06935: RPSI07_RS06935 - cupin domain-containing protein, at 1,846,595 to 1,846,939 _RS06935
Group Condition RPSI07_RS06920 RPSI07_RS24695 RPSI07_RS06925 RPSI07_RS06930 RPSI07_RS06935
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.3 -0.1 -0.3 -1.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.4 +0.1 -0.0 -0.1 -1.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 +0.0 -0.0 -0.2 -0.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.4 -0.0 -0.1 -0.1 -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.4 -0.1 -0.2 -0.1 -0.1
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.2 +0.0 -0.0 +0.0 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 -0.6 +0.2 -0.5 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.3 -0.0 -0.1 -0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.1 -0.0 -0.2 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 -0.1 -0.1 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 -0.4 +0.2 -0.4 -0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.4 -0.0 +0.1 -0.1
smsa no antibiotic control SMSA no antibiotic control -0.3 +0.1 -0.2 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.1 +0.1 -0.1 -0.2
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.3 -0.0 -0.0 -0.2 -0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 +0.1 -0.0 +0.1 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 -0.2 -0.1 +0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.2 +0.2 -0.2 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.0 +0.0 -0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.1 +0.0 -0.1 -0.3
m63_quarter_strength M63_quarter_strength -0.1 +0.3 -0.0 +0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 -0.0 -0.0 -0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.3 -0.1 -0.1 +0.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.0 -0.2 -0.0 +0.2 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.0 +0.2 -0.0 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 +0.3 -0.0 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.0 +0.2 +0.1 +0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.3 +0.2 +0.1 +0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 +0.3 +0.0 -0.0 +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 +0.2 +0.0 +0.2 +0.6
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RPSI07_RS06920
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RPSI07_RS24695
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RPSI07_RS06930
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RPSI07_RS06935
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