Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS06875 and RPSI07_RS24670 are separated by 610 nucleotidesRPSI07_RS24670 and RPSI07_RS06885 overlap by 8 nucleotidesRPSI07_RS06885 and RPSI07_RS06890 are separated by 22 nucleotidesRPSI07_RS06890 and RPSI07_RS24675 are separated by 163 nucleotides RPSI07_RS06875: RPSI07_RS06875 - DUF4124 domain-containing protein, at 1,831,914 to 1,832,792 _RS06875 RPSI07_RS24670: RPSI07_RS24670 - hypothetical protein, at 1,833,403 to 1,833,951 _RS24670 RPSI07_RS06885: RPSI07_RS06885 - adenylosuccinate synthetase, at 1,833,944 to 1,835,659 _RS06885 RPSI07_RS06890: RPSI07_RS06890 - hypothetical protein, at 1,835,682 to 1,836,293 _RS06890 RPSI07_RS24675: RPSI07_RS24675 - hypothetical protein, at 1,836,457 to 1,836,795 _RS24675
Group Condition RPSI07_RS06875 RPSI07_RS24670 RPSI07_RS06885 RPSI07_RS06890 RPSI07_RS24675
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.3 -0.2 -0.2 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -0.4 -0.2 -0.1 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.5 -0.1 -0.0 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 +0.0 -0.1 +0.2 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.9 -0.2 -0.1 -0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 -0.2 -0.0 -0.3 +0.0
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.2 -0.1 -0.2 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.0 -0.1 -0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.1 -0.1 -0.3 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.2 -0.1 +0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.1 -0.1 +0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.2 -0.1 +0.3 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 +0.1 -0.1 -0.1 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.3 -0.2 -0.0 -0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.2 -0.2 -0.1 -0.4 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 +0.3 +0.1 +0.3 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.2 -0.2 -0.1 -0.2 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 +0.0 -0.0 -0.4 -0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 -0.0 +0.0 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.0 -0.2 -0.1 -0.3 +0.3
smsa no antibiotic control SMSA no antibiotic control +0.2 +0.1 +0.0 -0.1 -0.4
smsa no antibiotic control SMSA no antibiotic control -0.1 -0.2 -0.0 -0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.2 -0.1 -0.0 -0.1 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.4 +0.1 -0.1 -0.0 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 +0.3 +0.1 +0.3 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 +0.0 +0.1 +0.0 -0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 +0.1 +0.1 +0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.2 -0.1 +0.1 +0.3 -0.4
stress SMSA with Ralstonia_antibiotic_mix -0.3 +0.1 -0.1 -0.1 +0.4
m63_quarter_strength M63_quarter_strength +0.2 +0.1 +0.1 -0.1 +0.3
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RPSI07_RS06875
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RPSI07_RS24670
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