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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS05765 and RPSI07_RS05770 are separated by 195 nucleotides
RPSI07_RS05770 and RPSI07_RS05775 are separated by 4 nucleotides
RPSI07_RS05775 and RPSI07_RS05780 are separated by 76 nucleotides
RPSI07_RS05780 and RPSI07_RS05785 are separated by 3 nucleotides
RPSI07_RS05765: RPSI07_RS05765 - hypothetical protein, at 1,573,804 to 1,574,709
_RS05765
RPSI07_RS05770: RPSI07_RS05770 - XRE family transcriptional regulator, at 1,574,905 to 1,575,171
_RS05770
RPSI07_RS05775: RPSI07_RS05775 - type II toxin-antitoxin system HipA family toxin, at 1,575,176 to 1,576,522
_RS05775
RPSI07_RS05780: RPSI07_RS05780 - DUF2236 domain-containing protein, at 1,576,599 to 1,577,495
_RS05780
RPSI07_RS05785: RPSI07_RS05785 - MFS transporter, at 1,577,499 to 1,579,067
_RS05785
Group
Condition
RPSI07
_RS05765
RPSI07
_RS05770
RPSI07
_RS05775
RPSI07
_RS05780
RPSI07
_RS05785
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
N.D.
-1.0
-0.1
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
N.D.
-1.2
+0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.1
N.D.
-0.1
-0.3
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.1
N.D.
-0.1
-0.2
-0.4
cpg no stress control
CPG no stress control
+0.3
N.D.
-0.2
-0.3
-0.5
stress
SMSA with Ralstonia_antibiotic_mix
+0.2
N.D.
-0.4
-0.1
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.2
N.D.
-0.4
-0.2
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.3
N.D.
-0.3
-0.2
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.3
N.D.
-0.2
-0.3
-0.2
smsa no antibiotic control
SMSA no antibiotic control
+0.3
N.D.
-0.1
-0.3
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.2
N.D.
+0.2
-0.5
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.5
N.D.
-0.4
-0.2
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+0.3
N.D.
-0.2
-0.1
-0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.2
N.D.
+0.3
-0.3
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+0.2
N.D.
+0.3
-0.3
-0.3
stress
SMSA with Ralstonia_antibiotic_mix
-0.1
N.D.
-0.3
-0.0
+0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.1
N.D.
+0.4
-0.2
-0.1
smsa no antibiotic control
SMSA no antibiotic control
-0.1
N.D.
-0.2
-0.1
+0.5
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
-0.2
N.D.
+0.4
-0.1
-0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.1
N.D.
-0.1
+0.4
-0.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.1
N.D.
-0.2
+0.4
-0.2
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.0
N.D.
-0.1
+0.5
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.1
N.D.
-0.1
+0.3
+0.2
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.1
N.D.
-0.1
+0.6
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.0
N.D.
-0.2
+0.4
+0.2
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.1
N.D.
-0.1
+0.5
+0.0
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.5
N.D.
+0.3
-0.3
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.2
N.D.
-0.0
+0.4
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.0
N.D.
-0.1
+0.2
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.1
N.D.
+0.5
+0.1
+0.3
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