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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS05700 and RPSI07_RS05705 are separated by 471 nucleotides
RPSI07_RS05705 and RPSI07_RS05710 are separated by 213 nucleotides
RPSI07_RS05710 and RPSI07_RS05715 are separated by 262 nucleotides
RPSI07_RS05715 and RPSI07_RS05720 are separated by 21 nucleotides
RPSI07_RS05700: RPSI07_RS05700 - polyisoprenoid-binding protein, at 1,559,520 to 1,560,095
_RS05700
RPSI07_RS05705: RPSI07_RS05705 - hypothetical protein, at 1,560,567 to 1,563,398
_RS05705
RPSI07_RS05710: RPSI07_RS05710 - lytic murein transglycosylase, at 1,563,612 to 1,564,895
_RS05710
RPSI07_RS05715: RPSI07_RS05715 - GbsR/MarR family transcriptional regulator, at 1,565,158 to 1,565,718
_RS05715
RPSI07_RS05720: RPSI07_RS05720 - cytochrome ubiquinol oxidase subunit I, at 1,565,740 to 1,567,128
_RS05720
Group
Condition
RPSI07
_RS05700
RPSI07
_RS05705
RPSI07
_RS05710
RPSI07
_RS05715
RPSI07
_RS05720
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.5
-0.0
+0.0
-0.5
-1.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.9
-0.0
+0.0
-0.4
-1.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.6
-0.1
-0.1
-0.3
-1.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.4
-0.2
-0.0
-0.5
-1.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.9
-0.2
-0.2
-0.3
-0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.7
-0.2
-0.1
-0.4
-0.4
stress
SMSA with Ralstonia_antibiotic_mix
-0.5
-0.0
+0.1
-0.3
-0.9
smsa no antibiotic control
SMSA no antibiotic control
-1.5
-0.1
-0.1
-0.0
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.6
-0.1
+0.0
-0.2
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.7
-0.0
+0.0
-0.1
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-1.4
+0.0
+0.1
-0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.5
-0.0
+0.0
-0.2
-0.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.9
+0.2
+0.2
-0.3
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.5
+0.1
+0.2
-0.3
-0.5
xylem sap
Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap
-0.9
-0.2
-0.1
+0.3
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.8
+0.0
+0.3
-0.3
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.7
+0.2
+0.1
-0.1
-0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+1.0
+0.1
+0.0
-0.2
-1.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.8
-0.1
-0.0
-0.2
-0.8
stress
SMSA with Ralstonia_antibiotic_mix
+1.1
+0.1
-0.1
-0.2
-1.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+1.1
+0.0
+0.0
-0.1
-1.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
+1.4
-0.1
-0.2
-0.1
-1.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.8
-0.1
-0.1
+0.0
-0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.8
-0.1
+0.0
-0.0
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+1.7
+0.1
-0.1
-0.1
-1.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+1.5
+0.0
-0.1
-0.1
-0.9
cpg no stress control
CPG no stress control
+1.2
+0.1
-0.0
+0.1
-0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+1.1
-0.0
-0.1
+0.3
-0.5
smsa no antibiotic control
SMSA no antibiotic control
+1.1
+0.1
+0.1
+0.1
-0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+1.2
+0.0
+0.0
+0.3
-0.4
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