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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS05470 and RPSI07_RS05475 are separated by 26 nucleotides
RPSI07_RS05475 and RPSI07_RS05480 are separated by 32 nucleotides
RPSI07_RS05480 and RPSI07_RS05485 are separated by 602 nucleotides
RPSI07_RS05485 and RPSI07_RS05490 are separated by 164 nucleotides
RPSI07_RS05470: RPSI07_RS05470 - permease, at 1,489,467 to 1,490,819
_RS05470
RPSI07_RS05475: RPSI07_RS05475 - ketohydroxyglutarate aldolase, at 1,490,846 to 1,491,472
_RS05475
RPSI07_RS05480: RPSI07_RS05480 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 1,491,505 to 1,492,230
_RS05480
RPSI07_RS05485: RPSI07_RS05485 - DNA-binding response regulator, at 1,492,833 to 1,493,102
_RS05485
RPSI07_RS05490: RPSI07_RS05490 - glycosyltransferase family 39 protein, at 1,493,267 to 1,494,922
_RS05490
Group
Condition
RPSI07
_RS05470
RPSI07
_RS05475
RPSI07
_RS05480
RPSI07
_RS05485
RPSI07
_RS05490
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.5
N.D.
-0.4
+0.0
-5.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.7
N.D.
-0.4
-0.2
-4.9
stress
SMSA with Ralstonia_antibiotic_mix
-0.6
N.D.
-0.1
-0.1
-5.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.5
N.D.
-0.0
-0.0
-5.1
stress
SMSA with Ralstonia_antibiotic_mix
-0.5
N.D.
+0.4
-0.6
-4.9
stress
SMSA with Ralstonia_antibiotic_mix
+1.0
N.D.
+0.5
+0.0
-6.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.5
N.D.
+0.2
-0.0
-6.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.5
N.D.
+0.0
+0.0
-4.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.4
N.D.
+0.3
+0.0
-5.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+1.2
N.D.
+0.4
-0.0
-6.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.4
N.D.
+0.0
-0.2
-4.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+1.2
N.D.
+0.1
+0.3
-6.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.4
N.D.
-0.4
+0.0
-3.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+1.0
N.D.
+0.6
+0.2
-6.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+0.0
N.D.
+0.2
-0.2
-4.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.4
N.D.
+0.2
-0.1
-4.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.5
N.D.
-0.2
-0.0
-3.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.0
N.D.
+0.5
-0.1
-4.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.1
N.D.
+0.2
+0.2
-4.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+1.0
N.D.
-0.0
-0.1
-4.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.3
N.D.
+0.1
-0.2
-3.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.1
N.D.
+0.3
-0.2
-2.8
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.8
N.D.
+0.2
-0.2
-1.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.1
N.D.
+0.3
-0.5
-2.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.4
N.D.
+0.2
-0.0
-3.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
+0.9
N.D.
+0.1
+0.1
-3.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+0.8
N.D.
-0.3
-0.1
-1.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.8
N.D.
+0.3
+0.1
-2.2
cpg no stress control
CPG no stress control
+1.0
N.D.
+0.3
-0.3
-1.4
smsa no antibiotic control
SMSA no antibiotic control
+1.2
N.D.
+0.3
-0.2
-1.5
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