Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS05250 and RPSI07_RS05255 are separated by 273 nucleotidesRPSI07_RS05255 and RPSI07_RS05260 are separated by 132 nucleotidesRPSI07_RS05260 and RPSI07_RS05265 are separated by 147 nucleotidesRPSI07_RS05265 and RPSI07_RS05270 are separated by 78 nucleotides RPSI07_RS05250: RPSI07_RS05250 - amino acid ABC transporter substrate-binding protein, at 1,438,833 to 1,439,723 _RS05250 RPSI07_RS05255: RPSI07_RS05255 - DNA-binding response regulator, at 1,439,997 to 1,440,524 _RS05255 RPSI07_RS05260: RPSI07_RS05260 - LuxR family transcriptional regulator, at 1,440,657 to 1,441,697 _RS05260 RPSI07_RS05265: RPSI07_RS05265 - MFS transporter, at 1,441,845 to 1,443,158 _RS05265 RPSI07_RS05270: RPSI07_RS05270 - putative hydro-lyase, at 1,443,237 to 1,444,094 _RS05270
Group Condition RPSI07_RS05250 RPSI07_RS05255 RPSI07_RS05260 RPSI07_RS05265 RPSI07_RS05270
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.2 -0.2 -0.3 -0.2 -0.1
stress SMSA with Ralstonia_antibiotic_mix -0.2 -0.3 -0.0 -0.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.3 -0.3 -0.2 -0.2 -0.2
cpg no stress control CPG no stress control -0.3 -0.4 +0.3 +0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 -0.3 +0.1 -0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -0.1 +0.5 +0.2 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.1 -0.1 +0.2 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.2 +0.2 -0.2 -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 +0.3 +0.1 +0.1 -0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 +0.6 -0.2 -0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 +0.4 -0.2 -0.1 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 +0.7 -0.1 -0.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 -0.0 -0.4 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.0 +0.6 +0.1 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.1 +0.5 -0.2 +0.0 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 +0.6 -0.1 -0.1 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.8 -0.0 -0.3 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.6 +0.3 -0.2 -0.1 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.5 -0.1 +0.2 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.7 +0.6 +0.1 -0.4 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.1 -0.1 -0.2 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.7 -0.1 +0.0 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.5 +0.2 -0.2 +0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.5 +0.1 +0.1 +0.2 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 -0.1 +0.1 -0.6 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 +0.5 +0.3 -0.4 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.9 -0.1 +0.2 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.0 +0.4 +0.0 +0.1 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.0 +0.5 +0.0 +0.3 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 +0.9 -0.0 +0.2 +0.1
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RPSI07_RS05250
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RPSI07_RS05255
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RPSI07_RS05265
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RPSI07_RS05270
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