Fitness for 5 genes in Ralstonia solanacearum PSI07

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RPSI07_RS24480	RPSI07_RS05235	RPSI07_RS05240	RPSI07_RS05245	RPSI07_RS05250
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	N.D.	+0.1	-1.0	-0.1	-0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.1	-0.1	+0.2	-0.8
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	N.D.	+0.1	-0.3	-0.1	-0.2
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	+0.1	-0.5	-0.1	+0.1
smsa no antibiotic control	SMSA no antibiotic control	N.D.	-0.2	+0.1	-0.1	-0.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	N.D.	-0.0	-0.5	+0.0	+0.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.1	-0.4	-0.0	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	N.D.	+0.1	-0.5	+0.2	+0.0
smsa no antibiotic control	SMSA no antibiotic control	N.D.	-0.1	-0.4	+0.2	+0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	-0.0	-0.3	+0.3	-0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	N.D.	-0.0	-0.1	-0.2	+0.3
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	N.D.	-0.1	+0.3	+0.1	-0.3
xylem sap	Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap	N.D.	+0.0	+0.4	+0.1	-0.2
cpg	CPG	N.D.	-0.1	+0.5	+0.1	-0.1
cpg no stress control	CPG no stress control	N.D.	+0.0	+0.4	+0.0	-0.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	N.D.	+0.1	+0.4	+0.1	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	N.D.	+0.1	-0.2	+0.3	+0.2
xylem sap	Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap	N.D.	+0.1	+0.4	-0.1	+0.1
stress	SMSA with Ralstonia_antibiotic_mix	N.D.	+0.1	+0.7	-0.1	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	N.D.	+0.2	-0.2	+0.4	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	+0.1	+0.3	-0.1	+0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	+0.1	+0.2	-0.0	+0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	N.D.	+0.1	+0.1	+0.1	+0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	N.D.	-0.0	+0.2	+0.3	+0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.0	+0.7	-0.3	+0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	N.D.	-0.0	+0.1	+0.1	+0.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	N.D.	+0.2	+0.0	+0.6	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	N.D.	+0.1	+0.2	+0.2	+0.5
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	N.D.	-0.1	+1.0	-0.3	+0.7
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	N.D.	+0.1	+0.9	+0.1	+0.7