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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS05155 and RPSI07_RS05160 are separated by 97 nucleotides
RPSI07_RS05160 and RPSI07_RS05165 are separated by 282 nucleotides
RPSI07_RS05165 and RPSI07_RS05170 are separated by 301 nucleotides
RPSI07_RS05170 and RPSI07_RS05175 are separated by 36 nucleotides
RPSI07_RS05155: RPSI07_RS05155 - hypothetical protein, at 1,408,363 to 1,409,130
_RS05155
RPSI07_RS05160: RPSI07_RS05160 - LysR family transcriptional regulator, at 1,409,228 to 1,410,172
_RS05160
RPSI07_RS05165: RPSI07_RS05165 - alpha/beta hydrolase, at 1,410,455 to 1,411,546
_RS05165
RPSI07_RS05170: RPSI07_RS05170 - efflux RND transporter periplasmic adaptor subunit, at 1,411,848 to 1,413,173
_RS05170
RPSI07_RS05175: RPSI07_RS05175 - multidrug efflux RND transporter permease subunit, at 1,413,210 to 1,416,422
_RS05175
Group
Condition
RPSI07
_RS05155
RPSI07
_RS05160
RPSI07
_RS05165
RPSI07
_RS05170
RPSI07
_RS05175
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.4
-1.4
+0.6
-2.4
-1.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.0
-0.7
+0.5
-1.6
-1.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.3
-0.6
+0.2
-0.9
-0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.3
-0.8
+0.6
-0.7
-0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.6
-0.6
+0.7
-0.8
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.6
-0.4
+0.3
-0.6
-0.6
smsa no antibiotic control
SMSA no antibiotic control
-0.2
-0.7
+0.3
-0.6
-0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+0.0
-0.6
+0.3
-0.9
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.4
-0.8
+0.3
-0.4
-0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.3
-0.7
+0.7
-0.8
-0.7
stress
SMSA with Ralstonia_antibiotic_mix
-0.3
-0.4
+0.5
-0.9
-0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.5
-0.3
+0.1
-0.8
-1.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
-0.1
-1.6
+0.0
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.2
+0.3
+3.4
-2.7
-2.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.3
-0.4
+0.6
-0.7
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.5
+0.6
-1.6
-0.3
-0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.7
+0.4
-1.5
-0.2
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.1
+0.7
-1.0
+0.1
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.3
+0.8
+2.9
-1.7
-1.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.3
+0.7
-0.7
+0.6
+0.7
smsa no antibiotic control
SMSA no antibiotic control
+0.1
+0.6
-0.6
+0.8
+0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
+0.2
+0.3
-0.5
+0.8
+0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.4
+0.2
-0.2
+0.6
+0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.0
+0.5
-0.6
+1.1
+0.6
cpg no stress control
CPG no stress control
+0.2
+0.8
-0.3
+0.6
+0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+0.6
+0.5
-0.5
+0.7
+0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.4
+0.5
-0.1
+0.7
+0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.3
+0.7
-0.2
+1.1
+0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+0.3
+1.0
-0.4
+0.8
+0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.8
+1.5
+3.7
-0.6
-0.7
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