Fitness for 5 genes in Ralstonia solanacearum PSI07

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RPSI07_RS04800	RPSI07_RS04805	RPSI07_RS04810	RPSI07_RS04815	RPSI07_RS04820
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	-0.4	-0.1	-0.1	-0.1	-3.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	-0.5	-0.0	-0.3	-0.1	-2.1
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.7	+0.4	-0.3	+0.2	-2.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.1	-0.2	+0.2	-0.1	-2.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	-0.3	+0.2	-0.3	-0.0	-1.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	-0.4	+0.1	-0.3	-0.0	-1.3
smsa no antibiotic control	SMSA no antibiotic control	+0.1	+0.0	-0.3	-0.1	-1.6
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.1	-0.1	-0.2	-0.1	-1.1
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.2	-0.0	+0.2	-0.2	-1.4
cpg no stress control	CPG no stress control	-0.1	+0.0	-0.3	-0.1	-1.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	+0.0	+0.0	-0.2	-0.2	-1.2
cpg	CPG	+0.3	-0.1	-0.3	-0.2	-1.2
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.1	+0.0	+0.0	+0.0	-1.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	-0.2	-0.1	-0.3	-0.2	-0.6
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.1	+0.2	+0.1	-0.2	-1.3
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	-0.1	+0.1	-0.0	-0.3	-0.8
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	+0.1	+0.1	+0.0	-0.0	-1.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	-0.2	+0.2	-0.3	-0.1	-0.7
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	+0.2	-0.2	+0.1	+0.1	-1.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.4	-0.2	+0.2	-0.1	-1.3
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	+0.0	-0.3	+0.2	+0.2	-0.9
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	+0.2	-0.1	+0.0	+0.1	-1.0
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.2	-0.1	+0.1	+0.1	-0.9
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+0.2	-0.1	+0.2	+0.0	-0.8
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.8	+0.1	+0.0	+0.1	-1.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	-0.4	+0.0	-0.0	-0.0	+1.0
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet	+0.4	-0.2	-0.0	-0.1	+0.7
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.7	-0.0	+0.1	-0.3	+0.4
cpg no stress control	CPG no stress control	-0.3	-0.0	+0.1	+0.1	+1.2
stress	SMSA with Ralstonia_antibiotic_mix	-0.1	+0.1	-0.1	+0.1	+1.1