Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS03275 and RPSI07_RS03280 are separated by 77 nucleotidesRPSI07_RS03280 and RPSI07_RS03285 are separated by 229 nucleotidesRPSI07_RS03285 and RPSI07_RS03290 are separated by 398 nucleotidesRPSI07_RS03290 and RPSI07_RS03295 overlap by 68 nucleotides RPSI07_RS03275: RPSI07_RS03275 - alpha/beta hydrolase, at 893,295 to 894,167 _RS03275 RPSI07_RS03280: RPSI07_RS03280 - TetR/AcrR family transcriptional regulator, at 894,245 to 894,820 _RS03280 RPSI07_RS03285: RPSI07_RS03285 - MFS transporter, at 895,050 to 896,279 _RS03285 RPSI07_RS03290: RPSI07_RS03290 - translesion DNA synthesis-associated protein ImuA, at 896,678 to 897,613 _RS03290 RPSI07_RS03295: RPSI07_RS03295 - DNA polymerase Y family protein, at 897,546 to 899,117 _RS03295
Group Condition RPSI07_RS03275 RPSI07_RS03280 RPSI07_RS03285 RPSI07_RS03290 RPSI07_RS03295
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 -0.5 -0.2 -1.4 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.1 -0.4 -0.3 -1.3 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.0 -0.4 -0.2 -1.6 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.5 -0.4 -0.4 -0.6
smsa no antibiotic control SMSA no antibiotic control +0.0 -0.6 -0.3 -1.0 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -0.6 +0.0 -1.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 -0.4 -0.0 -1.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.1 -0.2 -0.2 -1.3 -0.1
stress SMSA with Ralstonia_antibiotic_mix +0.0 -0.1 -0.3 -1.2 +0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.0 -0.1 +0.1 -1.3 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.4 +0.1 -0.8 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 +0.2 +0.0 -1.7 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.0 -0.4 +0.0 -0.9 +0.1
cpg no stress control CPG no stress control -0.0 -0.6 +0.1 -0.7 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.2 +0.2 -1.2 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.1 -0.4 -0.2 -0.8 +0.5
m63_quarter_strength M63_quarter_strength +0.1 +0.6 -0.2 -0.9 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 +0.7 -0.2 -0.6 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.4 +0.0 -0.2 -0.7
stress SMSA with Ralstonia_antibiotic_mix +0.1 +0.0 -0.1 -0.7 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 +0.6 -0.2 -0.7 -0.0
cpg no stress control CPG no stress control +0.0 +0.4 -0.0 -0.8 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 +0.3 +0.0 +0.4 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.1 +0.3 -0.0 -0.4 +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 +0.5 -0.1 +0.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.0 +0.2 -0.0 +0.7 -0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 +0.5 -0.1 +0.6 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.1 +0.1 -0.1 +1.0 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.6 -0.1 +0.9 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.1 +0.8 -0.0 +4.7 +0.1
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