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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS02840 and RPSI07_RS02845 are separated by 1 nucleotides
RPSI07_RS02845 and RPSI07_RS02850 are separated by 12 nucleotides
RPSI07_RS02850 and RPSI07_RS02855 are separated by 110 nucleotides
RPSI07_RS02855 and RPSI07_RS02860 are separated by 12 nucleotides
RPSI07_RS02840: RPSI07_RS02840 - hypothetical protein, at 788,763 to 789,755
_RS02840
RPSI07_RS02845: RPSI07_RS02845 - hypothetical protein, at 789,757 to 790,164
_RS02845
RPSI07_RS02850: RPSI07_RS02850 - hypothetical protein, at 790,177 to 790,947
_RS02850
RPSI07_RS02855: RPSI07_RS02855 - NAD(P)-dependent oxidoreductase, at 791,058 to 791,810
_RS02855
RPSI07_RS02860: RPSI07_RS02860 - amino acid ABC transporter permease, at 791,823 to 792,524
_RS02860
Group
Condition
RPSI07
_RS02840
RPSI07
_RS02845
RPSI07
_RS02850
RPSI07
_RS02855
RPSI07
_RS02860
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
-0.2
+0.2
+0.1
-0.3
-0.2
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.1
+0.3
-0.2
-0.4
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.1
-0.4
+0.2
-0.2
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
-0.1
+0.3
-0.3
-0.1
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.2
-0.4
-0.0
+0.4
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.2
+0.2
-0.1
-0.3
-0.2
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.6
+0.0
+0.1
+0.3
+0.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.2
+0.3
-0.4
-0.1
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
+0.0
-0.4
-0.2
+0.4
+0.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.3
-0.1
+0.1
-0.2
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.1
-0.1
-0.3
+0.3
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
+0.2
-0.4
+0.3
-0.1
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.1
+0.3
-0.2
+0.5
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
+0.2
-0.4
+0.3
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.3
+0.7
-0.3
-0.2
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.0
-0.2
+0.5
+0.2
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.3
+0.5
+0.0
-0.3
-0.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.3
+0.4
-0.3
-0.0
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-0.1
+0.4
-0.3
+0.1
+0.4
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.5
-0.3
+0.3
+0.1
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.6
+0.2
-0.3
+0.2
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.1
+0.5
+0.3
-0.1
+0.2
stress
SMSA with Ralstonia_antibiotic_mix
+0.1
+0.6
-0.1
+0.1
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.1
+0.5
+0.1
-0.1
+0.2
m63_quarter_strength
M63_quarter_strength
+0.5
-0.5
+0.5
+0.2
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
+0.1
+0.5
+0.4
-0.2
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.4
+0.8
-0.6
+0.5
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.0
+0.5
+0.3
-0.0
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.3
+0.4
+0.0
+0.1
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.6
+1.0
-0.4
+0.4
-0.4
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RPSI07_RS02850
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