Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS02585 and RPSI07_RS02590 are separated by 46 nucleotidesRPSI07_RS02590 and RPSI07_RS02595 are separated by 273 nucleotidesRPSI07_RS02595 and RPSI07_RS02600 are separated by 178 nucleotidesRPSI07_RS02600 and RPSI07_RS02605 are separated by 73 nucleotides RPSI07_RS02585: RPSI07_RS02585 - tRNA synthetase subunit beta, at 736,326 to 737,042 _RS02585 RPSI07_RS02590: RPSI07_RS02590 - EamA/RhaT family transporter, at 737,089 to 737,985 _RS02590 RPSI07_RS02595: RPSI07_RS02595 - AraC family transcriptional regulator, at 738,259 to 739,083 _RS02595 RPSI07_RS02600: RPSI07_RS02600 - acyl-CoA dehydrogenase, at 739,262 to 740,419 _RS02600 RPSI07_RS02605: RPSI07_RS02605 - DUF2165 domain-containing protein, at 740,493 to 740,996 _RS02605
Group Condition RPSI07_RS02585 RPSI07_RS02590 RPSI07_RS02595 RPSI07_RS02600 RPSI07_RS02605
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -2.5 -1.5 -0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -1.9 -1.8 -0.4 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 -1.6 -1.5 +0.2 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -1.8 -1.3 +0.2 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -2.1 -1.5 +0.2 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -1.8 -1.2 +0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -1.5 -1.2 -0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -1.1 -1.3 -0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -1.7 -1.7 +0.3 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 -1.6 -1.4 +0.1 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 -1.3 -1.0 -0.0 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 -1.4 -1.0 +0.2 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 -1.0 -1.0 -0.1 +0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -1.6 -1.0 -0.0 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -1.2 -0.8 +0.2 -0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -1.4 -0.7 +0.1 +0.3
m63_quarter_strength M63_quarter_strength +0.1 -0.8 -0.8 -0.1 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 -1.3 -1.0 -0.0 +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.1 -0.3 -0.6 -0.1 -0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 -0.7 -0.8 +0.2 +0.2
m63_quarter_strength M63_quarter_strength +0.1 -0.9 -0.6 +0.0 +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 -0.8 -0.3 +0.1 +0.1
smsa no antibiotic control SMSA no antibiotic control +0.3 -0.3 -0.4 -0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 -1.3 -0.4 +0.2 +0.3
m63_quarter_strength M63_quarter_strength +0.3 -0.7 -0.5 +0.2 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.3 -0.5 -0.2 +0.1 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.3 -0.3 -0.5 -0.2 +0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 -0.7 +0.5 +0.1 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 +0.6 +0.2 +0.0 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 +0.4 +0.6 +0.3 +0.1
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RPSI07_RS02585
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RPSI07_RS02590
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RPSI07_RS02600
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RPSI07_RS02605
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