Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS02570 and RPSI07_RS02575 overlap by 8 nucleotidesRPSI07_RS02575 and RPSI07_RS02580 overlap by 4 nucleotidesRPSI07_RS02580 and RPSI07_RS02585 are separated by 89 nucleotidesRPSI07_RS02585 and RPSI07_RS02590 are separated by 46 nucleotides RPSI07_RS02570: RPSI07_RS02570 - anthranilate phosphoribosyltransferase, at 732,331 to 733,365 _RS02570 RPSI07_RS02575: RPSI07_RS02575 - FAD-binding protein, at 733,358 to 735,559 _RS02575 RPSI07_RS02580: RPSI07_RS02580 - YggS family pyridoxal phosphate-dependent enzyme, at 735,556 to 736,236 _RS02580 RPSI07_RS02585: RPSI07_RS02585 - tRNA synthetase subunit beta, at 736,326 to 737,042 _RS02585 RPSI07_RS02590: RPSI07_RS02590 - EamA/RhaT family transporter, at 737,089 to 737,985 _RS02590
Group Condition RPSI07_RS02570 RPSI07_RS02575 RPSI07_RS02580 RPSI07_RS02585 RPSI07_RS02590
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.1 -0.0 +0.2 -2.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.3 +0.2 +0.1 -2.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.1 +0.0 -0.3 -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.0 +0.1 +0.0 -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.1 -0.4 +0.4 -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 +0.0 -0.1 +0.1 -1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.2 +0.2 +0.1 -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.2 +0.2 +0.1 -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.1 +0.3 +0.2 -1.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.0 +0.2 +0.0 -1.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 -0.1 -0.0 -1.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.1 +0.0 -0.2 -0.8
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.2 +0.1 +0.2 -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.1 -0.1 +0.1 -1.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +0.1 +0.2 -0.0 -1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 +0.1 -0.1 +0.5 -1.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 +0.1 +0.2 -0.1 -0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.3 +0.0 +0.1 -0.2 -1.0
smsa no antibiotic control SMSA no antibiotic control -0.2 -0.0 -0.4 +0.3 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.2 +0.3 +0.2 -1.2
m63_quarter_strength M63_quarter_strength +0.1 +0.2 +0.3 +0.1 -0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 +0.3 -0.3 +0.3 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.0 +0.0 -0.4 +0.5 -0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 -0.2 +0.2 +0.6 -0.7
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.5 +0.6 +0.1 -1.3
m63_quarter_strength M63_quarter_strength +0.4 +0.3 +0.3 +0.1 -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 -0.1 +0.7 +0.1 -0.0
m63_quarter_strength M63_quarter_strength +0.6 +0.2 +0.3 +0.3 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.2 -0.1 +0.6 +0.2 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.2 -0.1 +0.3 +0.2 +0.6
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RPSI07_RS02570
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