Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS02525 and RPSI07_RS02530 are separated by 730 nucleotidesRPSI07_RS02530 and RPSI07_RS02535 are separated by 44 nucleotidesRPSI07_RS02535 and RPSI07_RS02540 overlap by 1 nucleotidesRPSI07_RS02540 and RPSI07_RS02545 are separated by 76 nucleotides RPSI07_RS02525: RPSI07_RS02525 - ankyrin repeat domain-containing protein, at 721,089 to 723,359 _RS02525 RPSI07_RS02530: RPSI07_RS02530 - curli production assembly protein CsgG, at 724,090 to 724,719 _RS02530 RPSI07_RS02535: RPSI07_RS02535 - DUF4810 domain-containing protein, at 724,764 to 725,129 _RS02535 RPSI07_RS02540: RPSI07_RS02540 - hypothetical protein, at 725,129 to 725,800 _RS02540 RPSI07_RS02545: RPSI07_RS02545 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 725,877 to 728,207 _RS02545
Group Condition RPSI07_RS02525 RPSI07_RS02530 RPSI07_RS02535 RPSI07_RS02540 RPSI07_RS02545
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.0 -0.0 -0.1 -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.2 -0.2 -0.1 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -0.1 +0.2 -0.1 -1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.1 -0.0 -0.0 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.1 -0.2 -0.0 -0.8
cpg CPG -0.2 +0.0 -0.4 -0.1 -0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 +0.1 -0.5 -0.2 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.0 -0.1 +0.2 -0.9
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.2 +0.1 -0.0 -0.7
m63_quarter_strength M63_quarter_strength -0.2 -0.2 -0.5 +0.1 -0.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.3 -0.1 +0.3 -0.8
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.1 +0.3 +0.0 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -0.0 -0.4 +0.2 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.1 +0.1 -0.4 -0.2 +0.1
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.2 -0.1 +0.3 -0.2 -0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.0 +0.3 -0.5 -0.1 +0.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.1 +0.5 +0.1 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.4 -0.0 -0.4 -0.1 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 -0.0 -0.5 +0.2 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -0.1 -0.4 +0.4 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.2 -0.1 +0.5 +0.1 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 -0.1 +0.5 -0.0 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.2 -0.1 +0.5 +0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 -0.1 +0.4 +0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 +0.2 +0.3 +0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.0 -0.1 +0.7 +0.2 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.2 -0.1 +0.7 +0.3 +0.2
smsa no antibiotic control SMSA no antibiotic control +0.2 -0.1 +0.7 +0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.0 +0.0 +0.7 +0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.4 +0.1 +0.4 +0.3 +0.2
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RPSI07_RS02525
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RPSI07_RS02530
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RPSI07_RS02540
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RPSI07_RS02545
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