Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS02225 and RPSI07_RS02230 overlap by 4 nucleotidesRPSI07_RS02230 and RPSI07_RS02235 are separated by 2 nucleotidesRPSI07_RS02235 and RPSI07_RS02240 overlap by 4 nucleotidesRPSI07_RS02240 and RPSI07_RS02245 are separated by 436 nucleotides RPSI07_RS02225: RPSI07_RS02225 - precorrin-2 C(20)-methyltransferase, at 651,018 to 651,749 _RS02225 RPSI07_RS02230: RPSI07_RS02230 - cobalamin biosynthesis protein CbiD, at 651,746 to 652,897 _RS02230 RPSI07_RS02235: RPSI07_RS02235 - membrane protein, at 652,900 to 654,495 _RS02235 RPSI07_RS02240: RPSI07_RS02240 - cobalt-precorrin-7 (C(5))-methyltransferase, at 654,492 to 655,199 _RS02240 RPSI07_RS02245: RPSI07_RS02245 - VWA domain-containing protein, at 655,636 to 657,540 _RS02245
Group Condition RPSI07_RS02225 RPSI07_RS02230 RPSI07_RS02235 RPSI07_RS02240 RPSI07_RS02245
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 -0.6 -0.9 -0.7 -1.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 -0.3 -0.4 -0.8 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.2 +0.2 -1.3 -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.3 -0.3 -0.8 -0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.2 -0.5 -0.3 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.0 -0.2 -0.8 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.2 -0.4 -0.6 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -0.2 -0.3 -0.2 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.2 -0.1 -0.4 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.1 -0.3 -0.6 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 +0.2 -0.3 -0.4 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.4 -0.2 +0.0 -0.6 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.3 -0.4 -0.1 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.2 -0.4 -0.8 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -0.0 +0.1 -0.4 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.4 -0.3 +0.2 -0.6 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.3 -0.3 +0.4 -0.3 -0.1
stress SMSA with Ralstonia_antibiotic_mix -0.4 +0.3 -0.2 +0.2 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.1 +0.1 +0.3 -0.4 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 -0.2 +0.5 -0.3 -0.1
smsa no antibiotic control SMSA no antibiotic control -0.2 -0.1 +0.3 -0.4 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 -0.2 +0.3 -0.5 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 -0.1 +0.2 -0.5 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.0 -0.2 +0.1 -0.4 +0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.3 -0.0 +0.2 -0.6 +0.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 -0.0 +0.0 -0.6 +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.3 -0.1 +0.3 -0.2 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.2 -0.2 +0.9 -0.0 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.0 -0.1 +0.3 -0.2 +0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.0 +0.1 +0.3 +0.1 +0.7
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RPSI07_RS02225
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RPSI07_RS02230
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RPSI07_RS02240
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RPSI07_RS02245
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