Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS01525 and RPSI07_RS01530 are separated by 101 nucleotidesRPSI07_RS01530 and RPSI07_RS01535 are separated by 236 nucleotidesRPSI07_RS01535 and RPSI07_RS01540 overlap by 4 nucleotidesRPSI07_RS01540 and RPSI07_RS01545 are separated by 35 nucleotides RPSI07_RS01525: RPSI07_RS01525 - mannosyltransferase, at 404,965 to 406,350 _RS01525 RPSI07_RS01530: RPSI07_RS01530 - flagellar hook-basal body complex protein FliE, at 406,452 to 406,784 _RS01530 RPSI07_RS01535: RPSI07_RS01535 - flagellar basal body M-ring protein FliF, at 407,021 to 408,856 _RS01535 RPSI07_RS01540: RPSI07_RS01540 - flagellar motor switch protein FliG, at 408,853 to 409,845 _RS01540 RPSI07_RS01545: RPSI07_RS01545 - flagellar assembly protein FliH, at 409,881 to 410,627 _RS01545
Group Condition RPSI07_RS01525 RPSI07_RS01530 RPSI07_RS01535 RPSI07_RS01540 RPSI07_RS01545
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. -0.1 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 N.D. -0.1 -0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.1 -0.2 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 N.D. -0.3 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.2 N.D. -0.1 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.2 N.D. +0.0 -0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 N.D. +0.2 -0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.2 +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.1 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. +0.2 -0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 N.D. +0.2 -0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 N.D. +0.2 +0.1 N.D.
smsa no antibiotic control SMSA no antibiotic control +0.2 N.D. -0.1 +0.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 N.D. +0.2 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.0 N.D. -0.1 +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix +0.3 N.D. -0.1 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.1 +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 N.D. -0.1 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.4 N.D. -0.1 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. +0.1 +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 N.D. +0.3 +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 N.D. +0.1 +0.3 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 N.D. +0.2 +0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.2 N.D. +0.2 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.3 N.D. +0.1 +0.3 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.2 N.D. +0.1 +0.4 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 N.D. +0.2 +0.3 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 N.D. +0.3 +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 N.D. +0.2 +0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.6 N.D. +0.2 +0.7 N.D.
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RPSI07_RS01525
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RPSI07_RS01530
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RPSI07_RS01540
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RPSI07_RS01545
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