Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS01375 and RPSI07_RS01380 are separated by 115 nucleotidesRPSI07_RS01380 and RPSI07_RS01385 are separated by 102 nucleotidesRPSI07_RS01385 and RPSI07_RS01390 are separated by 413 nucleotidesRPSI07_RS01390 and RPSI07_RS01395 are separated by 161 nucleotides RPSI07_RS01375: RPSI07_RS01375 - flagellar protein FlgN, at 377,749 to 378,210 _RS01375 RPSI07_RS01380: RPSI07_RS01380 - flagellar biosynthesis anti-sigma factor FlgM, at 378,326 to 378,646 _RS01380 RPSI07_RS01385: RPSI07_RS01385 - flagella basal body P-ring formation protein FlgA, at 378,749 to 379,630 _RS01385 RPSI07_RS01390: RPSI07_RS01390 - flagellar basal body rod protein FlgB, at 380,044 to 380,505 _RS01390 RPSI07_RS01395: RPSI07_RS01395 - flagellar basal body rod protein FlgC, at 380,667 to 381,074 _RS01395
Group Condition RPSI07_RS01375 RPSI07_RS01380 RPSI07_RS01385 RPSI07_RS01390 RPSI07_RS01395
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 N.D. +0.5 +0.4 -1.9
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.2 N.D. -0.1 -0.2 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.7 N.D. -0.2 -0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.2 N.D. +0.1 +0.1 -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.0 N.D. -0.2 +0.4 -1.0
smsa no antibiotic control SMSA no antibiotic control +0.6 N.D. -0.1 -0.1 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.8 N.D. +0.2 +0.0 +0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.5 N.D. +0.1 -0.2 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 N.D. -0.2 +0.3 -0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.7 N.D. +0.0 +0.2 +0.6
smsa no antibiotic control SMSA no antibiotic control -0.6 N.D. +0.1 -0.0 +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.7 N.D. -0.0 -0.1 +1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.3 N.D. +0.1 +0.4 -0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 N.D. +0.1 -0.4 +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.5 N.D. -0.1 +0.3 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.3 N.D. +0.1 +0.5 -0.7
stress SMSA with Ralstonia_antibiotic_mix -0.4 N.D. +0.1 +0.1 +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.3 N.D. +0.1 +0.6 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 N.D. +0.2 -0.1 +1.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.4 N.D. +0.2 +0.2 +0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 N.D. +0.2 +0.0 +0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.4 N.D. +0.2 +0.2 +0.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 N.D. +0.0 +0.6 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. +0.6 +0.5 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. +0.4 +0.1 +1.1
m63_quarter_strength M63_quarter_strength +0.3 N.D. +0.2 +0.4 +1.1
cpg CPG +1.5 N.D. +0.7 +0.5 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 N.D. +0.7 +0.4 +1.1
cpg CPG +1.1 N.D. +0.7 +0.3 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 N.D. +1.0 +0.5 +1.3
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RPSI07_RS01375
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RPSI07_RS01380
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RPSI07_RS01390
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RPSI07_RS01395
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