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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS01335 and RPSI07_RS01340 overlap by 1 nucleotides
RPSI07_RS01340 and RPSI07_RS01345 are separated by 366 nucleotides
RPSI07_RS01345 and RPSI07_RS01350 are separated by 68 nucleotides
RPSI07_RS01350 and RPSI07_RS24195 are separated by 126 nucleotides
RPSI07_RS01335: RPSI07_RS01335 - organic hydroperoxide resistance protein, at 368,771 to 369,205
_RS01335
RPSI07_RS01340: RPSI07_RS01340 - nucleotidyltransferase family protein, at 369,205 to 369,864
_RS01340
RPSI07_RS01345: RPSI07_RS01345 - hypothetical protein, at 370,231 to 370,434
_RS01345
RPSI07_RS01350: RPSI07_RS01350 - GGDEF domain-containing protein, at 370,503 to 373,190
_RS01350
RPSI07_RS24195: RPSI07_RS24195 - hypothetical protein, at 373,317 to 373,685
_RS24195
Group
Condition
RPSI07
_RS01335
RPSI07
_RS01340
RPSI07
_RS01345
RPSI07
_RS01350
RPSI07
_RS24195
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-1.6
-0.4
N.D.
-0.0
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
-1.8
-0.1
N.D.
+0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix
-2.5
+0.2
N.D.
+0.2
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.7
-0.6
N.D.
-0.2
-0.1
cpg no stress control
CPG no stress control
-1.6
-0.2
N.D.
-0.1
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-2.8
+0.2
N.D.
+0.1
+0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-2.1
-0.1
N.D.
+0.1
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-1.8
-0.2
N.D.
+0.0
+0.4
smsa no antibiotic control
SMSA no antibiotic control
-1.9
+0.2
N.D.
-0.1
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-1.6
+0.0
N.D.
+0.0
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
-1.6
-0.0
N.D.
-0.0
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-1.5
+0.1
N.D.
-0.1
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-1.3
-0.4
N.D.
+0.1
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-1.4
+0.0
N.D.
-0.0
+0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-1.2
-0.0
N.D.
+0.1
+0.5
m63_quarter_strength
M63_quarter_strength
-1.0
-0.2
N.D.
+0.4
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.9
-0.2
N.D.
-0.2
+0.6
m63_quarter_strength
M63_quarter_strength
+0.8
-0.3
N.D.
+0.2
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.6
-0.2
N.D.
-0.0
+0.9
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+1.0
+0.1
N.D.
-0.1
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+1.9
-0.3
N.D.
-0.2
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.1
-0.4
N.D.
-0.1
+1.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+1.1
+0.1
N.D.
-0.1
+0.6
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+1.2
+0.1
N.D.
-0.1
+0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.9
-0.2
N.D.
-0.2
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+1.2
+0.2
N.D.
+0.0
+0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.8
+0.3
N.D.
+0.3
+0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.9
+0.1
N.D.
-0.1
-0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.7
+0.4
N.D.
-0.0
+0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.5
-0.1
N.D.
-0.2
+1.1
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