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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RPSI07_RS01305 and RPSI07_RS01310 are separated by 0 nucleotides
RPSI07_RS01310 and RPSI07_RS01315 are separated by 41 nucleotides
RPSI07_RS01315 and RPSI07_RS01320 are separated by 127 nucleotides
RPSI07_RS01320 and RPSI07_RS01325 are separated by 796 nucleotides
RPSI07_RS01305: RPSI07_RS01305 - heavy metal translocating P-type ATPase, at 359,997 to 362,351
_RS01305
RPSI07_RS01310: RPSI07_RS01310 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 362,352 to 362,828
_RS01310
RPSI07_RS01315: RPSI07_RS01315 - hypothetical protein, at 362,870 to 363,271
_RS01315
RPSI07_RS01320: RPSI07_RS01320 - 2-isopropylmalate synthase, at 363,399 to 365,129
_RS01320
RPSI07_RS01325: RPSI07_RS01325 - (2Fe-2S)-binding protein, at 365,926 to 366,384
_RS01325
Group
Condition
RPSI07
_RS01305
RPSI07
_RS01310
RPSI07
_RS01315
RPSI07
_RS01320
RPSI07
_RS01325
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-1.6
-3.1
-0.9
-0.0
+0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.5
-1.1
-1.1
-0.1
-0.1
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.0
-0.9
-0.0
-0.4
-0.5
smsa no antibiotic control
SMSA no antibiotic control
-0.1
-0.4
-0.7
-0.3
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.1
-0.6
-0.6
-0.1
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.1
-0.2
-0.7
-0.4
-0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.3
-0.5
-0.5
-0.0
-0.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.4
-0.3
-0.6
+0.0
+0.3
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.3
-0.2
-0.5
-0.3
+0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.5
+0.0
-0.5
+0.2
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.1
-0.2
+0.2
-0.7
smsa no antibiotic control
SMSA no antibiotic control
-0.3
-0.4
+0.3
-0.1
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.4
+0.4
-0.2
+0.0
-0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.0
+0.5
-0.6
-0.2
-0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.2
+0.1
-0.1
-0.1
-0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
+0.1
-0.1
+0.2
-0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.1
-0.6
+0.6
+0.1
-0.4
m63_quarter_strength
M63_quarter_strength
+0.1
+0.8
-1.0
+0.2
-0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.3
-0.4
+0.6
+0.0
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.3
-0.4
+0.6
-0.0
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
+0.4
+0.3
-0.2
-0.3
-0.1
m63_quarter_strength
M63_quarter_strength
-0.0
+0.5
-0.3
-0.2
+0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
+0.1
-0.2
+0.8
-0.0
-0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.1
-0.3
+0.7
+0.1
+0.0
cpg no stress control
CPG no stress control
-0.2
+0.5
-0.3
+0.0
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.3
+0.2
+0.6
+0.2
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.3
+0.6
-0.1
+0.3
-0.1
m63_quarter_strength
M63_quarter_strength
+0.1
+0.7
-0.5
-0.1
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
-0.2
-0.2
+0.8
+0.2
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.0
+1.4
-0.3
-0.1
+0.0
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