Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS01165 and RPSI07_RS01170 are separated by 150 nucleotidesRPSI07_RS01170 and RPSI07_RS01175 are separated by 121 nucleotidesRPSI07_RS01175 and RPSI07_RS01180 are separated by 349 nucleotidesRPSI07_RS01180 and RPSI07_RS01190 are separated by 971 nucleotides RPSI07_RS01165: RPSI07_RS01165 - hypothetical protein, at 321,916 to 322,320 _RS01165 RPSI07_RS01170: RPSI07_RS01170 - hypothetical protein, at 322,471 to 323,649 _RS01170 RPSI07_RS01175: RPSI07_RS01175 - APC family permease, at 323,771 to 325,402 _RS01175 RPSI07_RS01180: RPSI07_RS01180 - MATE family efflux transporter, at 325,752 to 327,116 _RS01180 RPSI07_RS01190: RPSI07_RS01190 - DNA-binding response regulator, at 328,088 to 328,978 _RS01190
Group Condition RPSI07_RS01165 RPSI07_RS01170 RPSI07_RS01175 RPSI07_RS01180 RPSI07_RS01190
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 +0.0 -1.3 +0.3 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.5 -0.2 -0.9 +0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.0 -1.2 +0.4 -0.4
stress SMSA with Ralstonia_antibiotic_mix -0.3 -0.3 -0.1 +0.1 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.1 -1.0 +0.5 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.2 -1.2 +0.5 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.2 -1.0 +0.3 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.2 -1.1 +0.5 -0.0
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.1 -0.1 -0.8 -0.2 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 +0.1 -1.2 +0.4 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.0 -0.9 +0.3 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 +0.0 -0.6 +0.3 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.1 -1.2 +0.4 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 -0.2 -0.7 +0.2 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.2 -0.1 -0.8 +0.1 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.0 -1.3 +0.4 +0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.0 -1.0 +0.5 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 -0.2 -0.7 +0.2 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 +0.1 -0.6 +0.1 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.3 -0.1 -0.4 +0.3 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.1 -0.9 +0.6 +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.1 -0.2 +1.0 -0.2 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.0 +0.0 +0.6 -0.3 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.1 -0.8 +0.4 +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.2 +0.1 -0.5 +0.4 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.4 +0.1 -0.4 +0.2 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.0 +0.2 +0.6 -0.4 -0.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 +0.5 -1.3 +0.2 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 +0.5 -1.0 +0.3 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.8 +0.4 -0.9 +0.2 +0.4
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RPSI07_RS01165
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RPSI07_RS01170
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RPSI07_RS01180
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RPSI07_RS01190
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