Fitness for 5 genes in Ralstonia solanacearum PSI07

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500 ntRPSI07_RS00065 and RPSI07_RS00070 are separated by 97 nucleotidesRPSI07_RS00070 and RPSI07_RS00075 are separated by 10 nucleotidesRPSI07_RS00075 and RPSI07_RS00080 are separated by 7 nucleotidesRPSI07_RS00080 and RPSI07_RS00085 overlap by 4 nucleotides RPSI07_RS00065: RPSI07_RS00065 - leu/ile/val-binding periplasmic (pbp) ABC transporter protein, at 16,521 to 17,681 _RS00065 RPSI07_RS00070: RPSI07_RS00070 - branched-chain amino acid ABC transporter permease, at 17,779 to 18,660 _RS00070 RPSI07_RS00075: RPSI07_RS00075 - branched-chain amino acid ABC transporter permease, at 18,671 to 19,570 _RS00075 RPSI07_RS00080: RPSI07_RS00080 - ABC transporter ATP-binding protein, at 19,578 to 20,375 _RS00080 RPSI07_RS00085: RPSI07_RS00085 - ABC transporter ATP-binding protein, at 20,372 to 21,106 _RS00085
Group Condition RPSI07_RS00065 RPSI07_RS00070 RPSI07_RS00075 RPSI07_RS00080 RPSI07_RS00085
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.6 -1.5 -1.2 -0.4
smsa no antibiotic control SMSA no antibiotic control +0.2 -0.5 -0.5 -1.1 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 -0.2 -1.0 -0.3 -0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -0.1 +0.2 -1.7 +0.1
stress SMSA with Ralstonia_antibiotic_mix +0.3 -0.3 +0.0 -1.2 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.4 -0.2 -0.3 -1.0 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 -0.0 -0.3 +0.2 -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.3 -0.3 -0.2 -0.8 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.6 -0.5 +0.2 -1.1 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.4 -0.3 -0.5 -0.9 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.4 -0.3 -0.1 -0.9 -0.0
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.3 -0.7 -0.2 +0.4 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.5 -0.4 +0.1 -0.6 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.0 +0.4 +0.2 -0.8 -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.0 -0.4 -0.6 +0.6 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.0 +0.1 -0.9 +0.9 -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -0.1 -0.5 +0.4 +0.4
smsa no antibiotic control SMSA no antibiotic control -0.4 +0.6 -0.5 +0.6 -0.2
m63_quarter_strength M63_quarter_strength -0.1 +0.4 +0.4 -0.6 +0.1
cpg no stress control CPG no stress control -0.5 +0.5 -0.2 +0.7 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.5 +0.5 -0.2 +0.4 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.5 +0.7 -0.0 +0.3 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.5 +0.7 +0.5 -0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 +0.7 -0.2 +0.9 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.3 +0.7 +0.2 +0.2 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.6 -0.4 +1.9 -1.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.2 +0.9 -0.1 +0.5 +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.2 +0.7 +0.2 +0.9 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.1 +0.6 +0.2 +0.9 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.1 +0.3 +0.7 +0.7 -0.0
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