Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum PSI07
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 81 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
RPSI07_RS00065 and RPSI07_RS00070 are separated by 97 nucleotides
RPSI07_RS00070 and RPSI07_RS00075 are separated by 10 nucleotides
RPSI07_RS00075 and RPSI07_RS00080 are separated by 7 nucleotides
RPSI07_RS00080 and RPSI07_RS00085 overlap by 4 nucleotides
RPSI07_RS00065: RPSI07_RS00065 - leu/ile/val-binding periplasmic (pbp) ABC transporter protein, at 16,521 to 17,681
_RS00065
RPSI07_RS00070: RPSI07_RS00070 - branched-chain amino acid ABC transporter permease, at 17,779 to 18,660
_RS00070
RPSI07_RS00075: RPSI07_RS00075 - branched-chain amino acid ABC transporter permease, at 18,671 to 19,570
_RS00075
RPSI07_RS00080: RPSI07_RS00080 - ABC transporter ATP-binding protein, at 19,578 to 20,375
_RS00080
RPSI07_RS00085: RPSI07_RS00085 - ABC transporter ATP-binding protein, at 20,372 to 21,106
_RS00085
Group
Condition
RPSI07
_RS00065
RPSI07
_RS00070
RPSI07
_RS00075
RPSI07
_RS00080
RPSI07
_RS00085
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
-0.6
-1.5
-1.2
-0.4
smsa no antibiotic control
SMSA no antibiotic control
+0.2
-0.5
-0.5
-1.1
-0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
-0.2
-1.0
-0.3
-0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days
-0.2
-0.1
+0.2
-1.7
+0.1
stress
SMSA with Ralstonia_antibiotic_mix
+0.3
-0.3
+0.0
-1.2
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
+0.4
-0.2
-0.3
-1.0
-0.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.4
-0.0
-0.3
+0.2
-0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
+0.3
-0.3
-0.2
-0.8
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
+0.6
-0.5
+0.2
-1.1
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+0.4
-0.3
-0.5
-0.9
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
+0.4
-0.3
-0.1
-0.9
-0.0
xylem sap
Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap
-0.3
-0.7
-0.2
+0.4
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
+0.5
-0.4
+0.1
-0.6
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.0
+0.4
+0.2
-0.8
-0.4
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
-0.0
-0.4
-0.6
+0.6
-0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
-0.0
+0.1
-0.9
+0.9
-0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.4
-0.1
-0.5
+0.4
+0.4
smsa no antibiotic control
SMSA no antibiotic control
-0.4
+0.6
-0.5
+0.6
-0.2
m63_quarter_strength
M63_quarter_strength
-0.1
+0.4
+0.4
-0.6
+0.1
cpg no stress control
CPG no stress control
-0.5
+0.5
-0.2
+0.7
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.5
+0.5
-0.2
+0.4
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.5
+0.7
-0.0
+0.3
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.5
+0.7
+0.5
-0.1
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.5
+0.7
-0.2
+0.9
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
-0.3
+0.7
+0.2
+0.2
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
+0.6
-0.4
+1.9
-1.1
-0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.2
+0.9
-0.1
+0.5
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
-0.2
+0.7
+0.2
+0.9
-0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.1
+0.6
+0.2
+0.9
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.1
+0.3
+0.7
+0.7
-0.0
remove
RPSI07_RS00065
plot
remove
RPSI07_RS00070
plot
remove
RPSI07_RS00075
remove
RPSI07_RS00080
plot
remove
RPSI07_RS00085
plot