Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS44640 and QEN71_RS44645 are separated by 722 nucleotidesQEN71_RS44645 and QEN71_RS44650 are separated by 78 nucleotidesQEN71_RS44650 and QEN71_RS44655 are separated by 134 nucleotidesQEN71_RS44655 and QEN71_RS44660 are separated by 307 nucleotides QEN71_RS44640: QEN71_RS44640 - transposase, at 394,033 to 394,503 _RS44640 QEN71_RS44645: QEN71_RS44645 - IS5/IS1182 family transposase, at 395,226 to 395,362 _RS44645 QEN71_RS44650: QEN71_RS44650 - IS5 family transposase, at 395,441 to 396,247 _RS44650 QEN71_RS44655: QEN71_RS44655 - transposase, at 396,382 to 397,014 _RS44655 QEN71_RS44660: QEN71_RS44660 - IS110 family transposase, at 397,322 to 398,383 _RS44660
Group Condition QEN71_RS44640 QEN71_RS44645 QEN71_RS44650 QEN71_RS44655 QEN71_RS44660
carbon source 2-Deoxy-D-Ribose (C) -0.5 -2.0 N.D. N.D. N.D.
motility Motility_inner_sample -0.1 -1.0 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) +0.1 -1.0 N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM -0.1 -0.5 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.4 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.3 -0.3 N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM +0.1 -0.7 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.5 N.D. N.D. N.D.
motility Motility_inner_sample -0.9 +0.5 N.D. N.D. N.D.
carbon source L-Histidine (C) +0.2 -0.6 N.D. N.D. N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM -0.5 +0.4 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) -0.5 +0.4 N.D. N.D. N.D.
carbon source D,L-Lactate (C) -0.6 +0.5 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.5 N.D. N.D. N.D.
carbon source Fumaric (C) -0.0 +0.6 N.D. N.D. N.D.
coculture Psabiae_ML3b with MT80 -0.0 +0.6 N.D. N.D. N.D.
carbon source D-Xylose (C) +0.3 +0.3 N.D. N.D. N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.8 N.D. N.D. N.D.
carbon source L-Rhamnose (C) -0.3 +1.0 N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM +0.2 +0.5 N.D. N.D. N.D.
carbon source succinate (C) +0.4 +0.3 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 +1.1 N.D. N.D. N.D.
carbon source D-Glucose (C) +0.2 +0.6 N.D. N.D. N.D.
carbon source Fumaric (C) +0.3 +0.5 N.D. N.D. N.D.
motility Motility_inner_sample +0.4 +0.5 N.D. N.D. N.D.
carbon source D,L-Lactate (C) -0.1 +1.2 N.D. N.D. N.D.
carbon source L-Leucine (C) +0.6 +0.7 N.D. N.D. N.D.
carbon source L-Glutamic (C) +0.5 +0.8 N.D. N.D. N.D.
stress LB_noSalt with Zinc 0.5 mM +0.3 +1.2 N.D. N.D. N.D.
supernatant Filtered_supernatant_MT183_in_LB +0.6 +1.3 N.D. N.D. N.D.
remove
QEN71_RS44640
plot
remove
QEN71_RS44645
plot
remove
QEN71_RS44650
remove
QEN71_RS44655
plot
remove
QEN71_RS44660
plot