Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS42575 and QEN71_RS42580 are separated by 1328 nucleotidesQEN71_RS42580 and QEN71_RS42585 overlap by 7 nucleotidesQEN71_RS42585 and QEN71_RS42590 are separated by 82 nucleotidesQEN71_RS42590 and QEN71_RS42595 are separated by 464 nucleotides QEN71_RS42575: QEN71_RS42575 - transposase, at 601,904 to 602,352 _RS42575 QEN71_RS42580: QEN71_RS42580 - carbamoyltransferase HypF, at 603,681 to 606,056 _RS42580 QEN71_RS42585: QEN71_RS42585 - hydrogenase expression/formation protein HypE, at 606,050 to 607,075 _RS42585 QEN71_RS42590: QEN71_RS42590 - isochorismatase family cysteine hydrolase, at 607,158 to 607,745 _RS42590 QEN71_RS42595: QEN71_RS42595 - GNAT family N-acetyltransferase, at 608,210 to 608,791 _RS42595
Group Condition QEN71_RS42575 QEN71_RS42580 QEN71_RS42585 QEN71_RS42590 QEN71_RS42595
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.3 -0.1 +0.0 -0.2
carbon source D-Sorbitol (C) N.D. -0.1 +0.1 -0.2 -0.4
carbon source D-Fructose (C) N.D. +0.1 +0.2 -0.3 -0.4
supernatant Filtered_supernatant_MT81_in_LB N.D. +0.1 -0.1 -0.4 -0.1
carbon source casaminos (C) N.D. -0.1 +0.1 -0.1 -0.3
stress LB_noSalt with Chloride 200 mM N.D. +0.1 +0.1 -0.1 -0.4
carbon source L-Histidine (C) N.D. -0.0 +0.2 -0.4 +0.0
stress LB_noSalt with Chloride 200 mM N.D. +0.1 +0.1 -0.3 -0.1
carbon source L-Aspartic Acid (C) N.D. -0.1 +0.2 -0.3 -0.0
supernatant Filtered_supernatant_MT80_in_LB N.D. +0.1 +0.1 -0.1 -0.3
motility Motility_inner_sample_with_outgrowth N.D. +0.1 +0.1 -0.1 -0.3
carbon source succinate (C) N.D. +0.0 +0.0 -0.4 +0.1
motility Motility_inner_sample N.D. -0.0 +0.3 -0.4 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. +0.1 +0.2 -0.0 -0.3
carbon source L-Glutamic (C) N.D. +0.1 +0.2 -0.2 -0.1
stress LB_noSalt with Zinc 0.5 mM N.D. +0.0 +0.2 +0.0 -0.3
supernatant Filtered_supernatant_MT183_in_LB N.D. +0.1 +0.2 -0.2 -0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.1 +0.3 -0.3 -0.1
carbon source L-Aspartic Acid (C) N.D. +0.1 +0.1 +0.1 -0.3
carbon source D-Glucose (C) N.D. +0.1 +0.1 -0.3 +0.0
motility Motility_outer_sample_with_outgrowth N.D. +0.2 +0.1 -0.3 +0.2
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. -0.0 +0.4 -0.4 +0.0
carbon source D,L-Malic Acid (C) N.D. +0.0 +0.2 +0.2 -0.3
carbon source L-Histidine (C) N.D. +0.1 +0.3 -0.2 -0.0
motility Motility_inner_sample N.D. +0.1 +0.1 +0.2 -0.2
carbon source L-Rhamnose (C) N.D. +0.0 +0.3 -0.3 +0.2
carbon source D,L-Lactate (C) N.D. +0.1 +0.1 -0.1 +0.2
carbon source succinate (C) N.D. -0.1 +0.1 +0.0 +0.3
motility Motility_outer_sample N.D. +0.0 +0.3 -0.1 +0.2
carbon source D-Xylose (C) N.D. +0.1 +0.4 +0.1 +0.2
remove
QEN71_RS42575
plot		 remove
QEN71_RS42580
plot		 remove
QEN71_RS42585		 remove
QEN71_RS42590
plot		 remove
QEN71_RS42595
plot