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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS42175 and QEN71_RS42180 are separated by 181 nucleotides
QEN71_RS42180 and QEN71_RS42185 overlap by 10 nucleotides
QEN71_RS42185 and QEN71_RS42190 are separated by 56 nucleotides
QEN71_RS42190 and QEN71_RS42195 are separated by 71 nucleotides
QEN71_RS42175: QEN71_RS42175 - nif-specific transcriptional activator NifA, at 517,576 to 519,219
_RS42175
QEN71_RS42180: QEN71_RS42180 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifE, at 519,401 to 520,933
_RS42180
QEN71_RS42185: QEN71_RS42185 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifN, at 520,924 to 522,273
_RS42185
QEN71_RS42190: QEN71_RS42190 - nitrogen fixation protein NifX, at 522,330 to 522,746
_RS42190
QEN71_RS42195: QEN71_RS42195 - CCE_0567 family metalloprotein, at 522,818 to 523,039
_RS42195
Group
Condition
QEN71
_RS42175
QEN71
_RS42180
QEN71
_RS42185
QEN71
_RS42190
QEN71
_RS42195
motility
Motility_outer_sample_with_outgrowth
-0.2
-0.4
-0.0
-0.8
N.D.
stress
LB_noSalt with Chloride 200 mM
-0.1
-0.2
-0.5
-0.7
N.D.
motility
Motility_outer_sample_with_outgrowth
-0.2
-0.3
-0.5
-0.3
N.D.
stress
LB_noSalt with Chloride 200 mM
-0.0
-0.2
-0.2
-0.6
N.D.
stress
LB_noSalt with Chloride 200 mM
-0.2
-0.3
-0.3
-0.2
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
-0.1
-0.1
-0.6
N.D.
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.4
-0.2
-0.3
N.D.
supernatant
Filtered_supernatant_MT71_in_LB
-0.2
+0.0
-0.3
-0.4
N.D.
carbon source
L-Glutamic (C)
-0.2
-0.0
-0.3
-0.4
N.D.
motility
Motility_inner_sample
-0.2
-0.1
-0.1
-0.5
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.3
-0.2
-0.0
-0.3
N.D.
carbon source
D,L-Malic Acid (C)
-0.3
-0.2
-0.2
+0.0
N.D.
motility
Motility_inner_sample
-0.0
-0.1
-0.2
-0.3
N.D.
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.3
-0.0
-0.3
N.D.
stress
LB_noSalt with Zinc 0.5 mM
-0.2
-0.4
-0.1
+0.0
N.D.
motility
Motility_inner_sample
-0.1
-0.1
-0.0
-0.4
N.D.
motility
Motility_inner_sample_with_outgrowth
-0.1
-0.3
-0.0
-0.2
N.D.
stress
LB_noSalt with Zinc 0.5 mM
-0.1
-0.1
-0.0
-0.4
N.D.
motility
Motility_inner_sample_with_outgrowth
-0.2
-0.2
+0.2
-0.3
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.0
-0.1
-0.1
-0.4
N.D.
stress
LB_noSalt with Chloride 200 mM
-0.3
-0.3
+0.0
-0.0
N.D.
motility
Motility_outer_sample
-0.0
-0.4
+0.3
-0.4
N.D.
carbon source
casaminos (C)
-0.1
-0.1
+0.2
-0.4
N.D.
carbon source
L-Leucine (C)
+0.1
-0.1
-0.2
-0.3
N.D.
carbon source
succinate (C)
-0.2
-0.1
+0.1
-0.2
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
-0.2
-0.1
+0.3
N.D.
carbon source
L-Glutamic (C)
+0.0
-0.0
+0.2
-0.4
N.D.
carbon source
D-Sorbitol (C)
+0.1
-0.1
-0.1
+0.2
N.D.
supernatant
Filtered_supernatant_MT81_in_LB
+0.0
-0.2
+0.4
-0.0
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.1
+0.2
+0.5
-0.2
N.D.
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