Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS41530 and QEN71_RS41535 are separated by 263 nucleotidesQEN71_RS41535 and QEN71_RS41540 are separated by 123 nucleotidesQEN71_RS41540 and QEN71_RS41545 are separated by 3 nucleotidesQEN71_RS41545 and QEN71_RS41550 are separated by 33 nucleotides QEN71_RS41530: QEN71_RS41530 - porin, at 391,313 to 392,488 _RS41530 QEN71_RS41535: QEN71_RS41535 - cupin domain-containing protein, at 392,752 to 393,876 _RS41535 QEN71_RS41540: QEN71_RS41540 - aminotransferase class V-fold PLP-dependent enzyme, at 394,000 to 395,133 _RS41540 QEN71_RS41545: QEN71_RS41545 - MFS transporter, at 395,137 to 396,429 _RS41545 QEN71_RS41550: QEN71_RS41550 - M20 family metallopeptidase, at 396,463 to 397,851 _RS41550
Group Condition QEN71_RS41530 QEN71_RS41535 QEN71_RS41540 QEN71_RS41545 QEN71_RS41550
carbon source succinate (C) -0.0 -0.1 -2.8 -0.0 -0.2
carbon source D,L-Lactate (C) -0.2 +0.2 -2.4 -0.0 -0.1
motility Motility_outer_sample_with_outgrowth -0.0 -0.1 -1.9 +0.0 -0.2
motility Motility_outer_sample +0.0 -0.2 -1.3 -0.1 -0.3
supernatant Filtered_supernatant_MT71_in_LB +0.0 -0.1 -1.5 -0.0 -0.1
carbon source D,L-Malic Acid (C) -0.1 +0.1 -1.6 +0.1 -0.1
stress LB_noSalt with Zinc 0.5 mM -0.1 +0.0 -1.1 +0.0 -0.4
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.3 -1.1 +0.0 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.1 -1.0 -0.3 -0.0
carbon source D-Xylose (C) -0.1 -0.3 -0.9 -0.0 -0.1
carbon source L-Leucine (C) -0.2 +0.0 -0.9 -0.1 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 -0.2 -0.6 -0.1 -0.3
stress LB_noSalt with Zinc 0.5 mM -0.1 +0.2 -1.0 -0.1 -0.1
stress LB_noSalt with Chloride 200 mM -0.2 +0.1 -0.2 -0.2 -0.5
carbon source L-Leucine (C) -0.1 +0.4 -1.3 +0.1 +0.1
carbon source Fumaric (C) -0.1 +0.2 -0.4 -0.3 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +1.2 -1.8 +0.1 -0.4
carbon source D,L-Malic Acid (C) +0.1 +0.2 -0.5 -0.2 -0.3
motility Motility_outer_sample_with_outgrowth +0.2 -0.1 -0.4 -0.4 +0.0
motility Motility_inner_sample -0.2 +0.3 -0.8 +0.2 -0.1
supernatant Filtered_supernatant_MT183_in_LB -0.2 +0.2 -0.6 +0.0 +0.0
motility Motility_inner_sample +0.1 +0.3 -0.8 -0.1 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.1 -0.7 +0.2 +0.1
carbon source L-Glutamic (C) +0.0 +0.1 +0.6 -0.1 -0.3
carbon source D-Fructose (C) -0.1 +0.3 +0.6 +0.1 -0.2
stress LB_noSalt with Chloride 200 mM -0.0 -0.1 +0.9 -0.0 -0.1
coculture Psabiae_ML3b with MT81 +0.0 +0.2 +0.4 +0.3 -0.2
motility Motility_inner_sample +0.1 +0.1 +0.7 +0.0 -0.2
carbon source D-Sorbitol (C) +0.1 +0.2 +1.0 +0.3 -0.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.8 +0.4 -0.0 +0.2
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