Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS39935 and QEN71_RS39940 are separated by 92 nucleotidesQEN71_RS39940 and QEN71_RS39945 are separated by 20 nucleotidesQEN71_RS39945 and QEN71_RS39950 are separated by 496 nucleotidesQEN71_RS39950 and QEN71_RS39955 are separated by 591 nucleotides QEN71_RS39935: QEN71_RS39935 - IS5 family transposase, at 44,857 to 45,938 _RS39935 QEN71_RS39940: QEN71_RS39940 - helix-turn-helix domain-containing protein, at 46,031 to 46,661 _RS39940 QEN71_RS39945: QEN71_RS39945 - IS5/IS1182 family transposase, at 46,682 to 46,855 _RS39945 QEN71_RS39950: QEN71_RS39950 - ectoine synthase, at 47,352 to 47,738 _RS39950 QEN71_RS39955: QEN71_RS39955 - transposase domain-containing protein, at 48,330 to 48,530 _RS39955
Group Condition QEN71_RS39935 QEN71_RS39940 QEN71_RS39945 QEN71_RS39950 QEN71_RS39955
stress LB_noSalt with Chloride 200 mM -0.2 -0.0 -1.7 -0.4 N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.3 -0.5 -0.7 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.1 -1.5 +0.0 N.D.
carbon source D-Xylose (C) +0.1 +0.0 -1.2 +0.1 N.D.
supernatant Filtered_supernatant_MT80_in_LB +0.3 -0.1 -1.0 -0.0 N.D.
motility Motility_outer_sample -0.8 +0.0 +0.3 -0.1 N.D.
carbon source succinate (C) -0.0 +0.0 +0.6 -0.7 N.D.
stress LB_noSalt with Chloride 200 mM -0.3 -0.2 +0.6 -0.0 N.D.
carbon source L-Glutamic (C) +0.4 +0.1 +0.1 -0.5 N.D.
motility Motility_inner_sample +0.4 +0.1 +0.7 -0.7 N.D.
carbon source L-Aspartic Acid (C) +0.1 -0.1 +0.8 -0.2 N.D.
carbon source L-Histidine (C) +0.3 -0.1 +0.8 -0.3 N.D.
motility Motility_outer_sample_with_outgrowth +0.4 -0.1 +0.6 -0.3 N.D.
carbon source D-Fructose (C) -0.4 +0.1 +0.9 +0.1 N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM +0.3 -0.2 +0.8 -0.2 N.D.
motility Motility_outer_sample_with_outgrowth +0.4 -0.0 +0.9 -0.4 N.D.
carbon source D-Glucose (C) +0.4 +0.3 +0.6 -0.4 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.4 +0.2 +0.5 -0.2 N.D.
motility Motility_outer_sample_with_outgrowth +0.1 -0.3 +1.0 +0.2 N.D.
carbon source D,L-Malic Acid (C) +0.2 +0.1 +1.4 -0.6 N.D.
carbon source succinate (C) -0.3 +0.0 +1.2 +0.1 N.D.
motility Motility_inner_sample +0.0 +0.0 +1.1 -0.1 N.D.
motility Motility_inner_sample_with_outgrowth +0.2 +0.2 +0.9 -0.2 N.D.
stress LB_noSalt with Chloride 200 mM +0.0 +0.2 +0.9 -0.0 N.D.
motility Motility_outer_sample +0.3 -0.2 +1.3 -0.2 N.D.
carbon source D-Sorbitol (C) -0.0 +0.2 +1.1 -0.1 N.D.
stress LB_noSalt with Chloride 200 mM +0.2 +0.0 +1.1 +0.0 N.D.
carbon source Fumaric (C) +0.1 -0.1 +0.9 +0.5 N.D.
motility Motility_outer_sample_with_outgrowth +0.2 -0.0 +1.7 -0.1 N.D.
carbon source Fumaric (C) +0.1 -0.0 +2.1 -0.1 N.D.
remove
QEN71_RS39935
plot		 remove
QEN71_RS39940
plot		 remove
QEN71_RS39945		 remove
QEN71_RS39950
plot		 remove
QEN71_RS39955
plot