Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS39600 and QEN71_RS39605 are separated by 166 nucleotidesQEN71_RS39605 and QEN71_RS39610 are separated by 108 nucleotidesQEN71_RS39610 and QEN71_RS39615 are separated by 206 nucleotidesQEN71_RS39615 and QEN71_RS39620 overlap by 8 nucleotides QEN71_RS39600: QEN71_RS39600 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 2,272,783 to 2,274,039 _RS39600 QEN71_RS39605: QEN71_RS39605 - LysR substrate-binding domain-containing protein, at 2,274,206 to 2,275,123 _RS39605 QEN71_RS39610: QEN71_RS39610 - glycine betaine ABC transporter substrate-binding protein, at 2,275,232 to 2,276,236 _RS39610 QEN71_RS39615: QEN71_RS39615 - glycine betaine/L-proline ABC transporter ATP-binding protein, at 2,276,443 to 2,277,570 _RS39615 QEN71_RS39620: QEN71_RS39620 - proline/glycine betaine ABC transporter permease, at 2,277,563 to 2,278,450 _RS39620
Group Condition QEN71_RS39600 QEN71_RS39605 QEN71_RS39610 QEN71_RS39615 QEN71_RS39620
stress LB_noSalt with Cobalt chloride 0.25 mM -0.4 -0.1 -0.9 -0.1 -1.7
motility Motility_outer_sample_with_outgrowth +0.2 -0.6 -0.8 +0.5 -0.8
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -0.4 +0.2 -0.6 +0.4
motility Motility_outer_sample_with_outgrowth +0.2 +0.2 -1.0 +0.5 -0.5
carbon source succinate (C) -0.2 -0.5 -0.6 +0.0 +0.7
stress LB_noSalt with Chloride 200 mM +0.0 -0.2 -0.8 -0.0 +0.7
supernatant Filtered_supernatant_MT71_in_LB -0.3 -0.0 +0.2 -0.7 +0.5
carbon source D-Glucose (C) -0.0 -0.3 -0.3 -0.1 +0.7
carbon source D,L-Lactate (C) -0.2 -0.3 -0.2 +0.3 +0.5
carbon source L-Histidine (C) -0.3 +0.6 -0.5 -0.0 +0.4
carbon source D,L-Lactate (C) +0.0 -0.7 +0.4 -0.1 +0.7
motility Motility_inner_sample -0.2 +0.3 -0.3 -0.1 +0.8
carbon source D-Fructose (C) -0.1 -0.2 +0.6 -0.5 +0.7
carbon source L-Rhamnose (C) -0.1 +0.1 -0.3 +0.2 +0.7
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.1 +0.1 -0.4 +0.8
motility Motility_outer_sample_with_outgrowth +0.2 +0.3 -0.6 +0.1 +0.5
stress LB_noSalt with Chloride 200 mM -0.1 -0.2 +0.0 -0.3 +1.2
carbon source D-Xylose (C) -0.0 -0.1 +0.2 -0.3 +0.9
motility Motility_outer_sample +0.3 -0.5 -0.4 +0.5 +0.7
stress LB_noSalt with Zinc 0.5 mM -0.1 +0.1 -0.5 +0.4 +0.8
carbon source L-Aspartic Acid (C) +0.0 -0.5 +0.1 +0.1 +1.0
supernatant Filtered_supernatant_MT183_in_LB +0.1 -0.5 +0.3 +0.1 +0.8
stress LB_noSalt with Chloride 200 mM +0.1 +0.1 -0.4 +0.4 +0.6
carbon source D-Sorbitol (C) -0.2 -0.1 -0.1 +0.5 +1.2
motility Motility_inner_sample -0.1 +0.4 +0.2 -0.1 +0.8
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.5 +0.1 +0.2 +0.8
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.4 +0.1 -0.3 +2.1
carbon source L-Histidine (C) +0.1 +0.1 -0.1 +0.5 +1.2
stress LB_noSalt with Chloride 200 mM +0.1 +0.5 +0.3 +0.0 +0.9
carbon source D,L-Malic Acid (C) +0.1 +0.7 +0.2 +0.1 +0.8
remove
QEN71_RS39600
plot		 remove
QEN71_RS39605
plot		 remove
QEN71_RS39610		 remove
QEN71_RS39615
plot		 remove
QEN71_RS39620
plot