Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS39430 and QEN71_RS39435 overlap by 4 nucleotidesQEN71_RS39435 and QEN71_RS39440 overlap by 8 nucleotidesQEN71_RS39440 and QEN71_RS39445 are separated by 296 nucleotidesQEN71_RS39445 and QEN71_RS39450 are separated by 147 nucleotides QEN71_RS39430: QEN71_RS39430 - molybdopterin-dependent oxidoreductase, at 2,227,733 to 2,230,804 _RS39430 QEN71_RS39435: QEN71_RS39435 - UbiX family flavin prenyltransferase, at 2,230,801 to 2,231,433 _RS39435 QEN71_RS39440: QEN71_RS39440 - UbiD family decarboxylase, at 2,231,426 to 2,232,985 _RS39440 QEN71_RS39445: QEN71_RS39445 - LysR family transcriptional regulator, at 2,233,282 to 2,234,223 _RS39445 QEN71_RS39450: QEN71_RS39450 - alpha/beta hydrolase, at 2,234,371 to 2,235,366 _RS39450
Group Condition QEN71_RS39430 QEN71_RS39435 QEN71_RS39440 QEN71_RS39445 QEN71_RS39450
carbon source succinate (C) -0.1 N.D. -0.6 -1.1 -0.2
carbon source D-Xylose (C) -0.2 N.D. -0.8 -0.8 +0.2
motility Motility_inner_sample -0.2 N.D. -0.3 -0.4 -0.4
motility Motility_outer_sample -0.0 N.D. -0.8 -0.0 -0.4
carbon source Fumaric (C) +0.1 N.D. -0.3 -0.4 -0.7
carbon source L-Histidine (C) -0.2 N.D. -0.1 -0.6 -0.4
stress LB_noSalt with Zinc 0.5 mM +0.2 N.D. -0.8 -0.5 -0.1
carbon source L-Aspartic Acid (C) +0.0 N.D. -0.3 -0.7 -0.2
carbon source L-Rhamnose (C) +0.0 N.D. -0.6 -0.3 -0.2
motility Motility_outer_sample_with_outgrowth -0.1 N.D. -0.6 -0.3 +0.1
carbon source L-Glutamic (C) -0.0 N.D. -0.1 -0.3 -0.4
supernatant Filtered_supernatant_MT71_in_LB +0.3 N.D. -0.0 -1.0 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 N.D. -0.1 -0.7 -0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 N.D. +0.1 -0.8 -0.3
carbon source Fumaric (C) +0.1 N.D. -0.3 -0.6 -0.0
supernatant Filtered_supernatant_MT80_in_LB -0.1 N.D. +0.1 -0.8 -0.0
carbon source 2-Deoxy-D-Ribose (C) +0.1 N.D. -0.2 -0.2 -0.4
stress LB_noSalt with Cobalt chloride 0.25 mM -0.1 N.D. -0.4 -0.3 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.0 N.D. -0.4 -0.4 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 N.D. -0.5 -0.2 +0.2
motility Motility_outer_sample -0.2 N.D. -0.3 -0.2 +0.2
stress LB_noSalt with Chloride 200 mM +0.1 N.D. +0.3 -0.6 -0.2
stress LB_noSalt with Chloride 200 mM -0.0 N.D. +0.2 -0.7 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 N.D. +0.2 -0.3 -0.4
motility Motility_outer_sample_with_outgrowth +0.0 N.D. -0.1 +0.4 -0.5
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 N.D. +0.4 -0.9 +0.5
stress LB_noSalt with Chloride 200 mM +0.2 N.D. +0.3 -0.5 +0.1
coculture Psabiae_ML3b with MT80 +0.3 N.D. +0.1 -0.3 +0.2
supernatant Filtered_supernatant_MT183_in_LB -0.1 N.D. +0.4 +0.3 -0.2
stress LB_noSalt with Cobalt chloride 0.25 mM +0.2 N.D. +0.4 -0.2 +0.1
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