Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS39365 and QEN71_RS39370 are separated by 45 nucleotidesQEN71_RS39370 and QEN71_RS39375 are separated by 43 nucleotidesQEN71_RS39375 and QEN71_RS39380 are separated by 196 nucleotidesQEN71_RS39380 and QEN71_RS39385 are separated by 432 nucleotides QEN71_RS39365: QEN71_RS39365 - DHA2 family efflux MFS transporter permease subunit, at 2,206,597 to 2,208,153 _RS39365 QEN71_RS39370: QEN71_RS39370 - efflux transporter outer membrane subunit, at 2,208,199 to 2,209,689 _RS39370 QEN71_RS39375: QEN71_RS39375 - HlyD family efflux transporter periplasmic adaptor subunit, at 2,209,733 to 2,211,037 _RS39375 QEN71_RS39380: QEN71_RS39380 - ATP-binding sensor histidine kinase, at 2,211,234 to 2,216,741 _RS39380 QEN71_RS39385: QEN71_RS39385 - GntR family transcriptional regulator, at 2,217,174 to 2,217,908 _RS39385
Group Condition QEN71_RS39365 QEN71_RS39370 QEN71_RS39375 QEN71_RS39380 QEN71_RS39385
motility Motility_outer_sample_with_outgrowth -0.2 +0.1 -0.3 +0.2 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.1 +0.1 +0.1 -0.6
carbon source L-Aspartic Acid (C) -0.5 +0.0 -0.1 +0.1 +0.2
motility Motility_outer_sample -0.2 -0.3 +0.1 +0.3 -0.1
stress LB_noSalt with Chloride 200 mM +0.2 -0.3 -0.1 +0.1 -0.2
carbon source D,L-Lactate (C) +0.1 -0.5 +0.3 -0.1 +0.0
motility Motility_outer_sample_with_outgrowth +0.3 -0.3 +0.2 +0.0 -0.2
carbon source D,L-Lactate (C) +0.0 -0.1 +0.3 +0.1 -0.2
motility Motility_outer_sample -0.3 +0.0 +0.1 +0.2 -0.0
carbon source L-Glutamic (C) +0.3 -0.2 -0.1 +0.1 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.0 +0.7 +0.0 -0.7
supernatant Filtered_supernatant_MT183_in_LB -0.1 +0.1 +0.2 +0.3 -0.2
carbon source L-Histidine (C) +0.4 -0.1 +0.1 +0.1 +0.1
stress LB_noSalt with Chloride 200 mM +0.1 +0.2 -0.2 +0.1 +0.2
carbon source Fumaric (C) +0.0 -0.2 +0.4 +0.2 +0.0
motility Motility_inner_sample_with_outgrowth +0.2 +0.1 -0.1 +0.2 +0.2
carbon source L-Leucine (C) +0.2 +0.3 -0.1 -0.0 +0.1
carbon source D-Sorbitol (C) +0.5 -0.1 -0.0 -0.1 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.0 +0.2 +0.2 -0.1
carbon source L-Rhamnose (C) +0.5 +0.1 +0.2 +0.0 -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.3 +0.2 +0.1 -0.2
stress LB_noSalt with Zinc 0.5 mM +0.1 -0.1 -0.1 +0.0 +0.6
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.0 +0.6 +0.1 -0.1
carbon source D,L-Malic Acid (C) +0.4 -0.3 +0.3 +0.0 +0.1
carbon source D-Fructose (C) +0.1 +0.2 +0.1 +0.1 +0.1
coculture Psabiae_ML3b with MT80 +0.1 +0.4 +0.3 +0.0 +0.0
supernatant Filtered_supernatant_MT81_in_LB -0.0 +0.1 +0.5 +0.1 +0.1
carbon source L-Glutamic (C) +0.1 +0.1 +0.4 +0.1 +0.3
motility Motility_inner_sample +0.4 +0.3 +0.2 -0.0 +0.1
carbon source L-Leucine (C) +0.2 +0.1 +0.5 +0.2 +0.2
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