Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS39105 and QEN71_RS39110 are separated by 148 nucleotidesQEN71_RS39110 and QEN71_RS39115 are separated by 28 nucleotidesQEN71_RS39115 and QEN71_RS39120 are separated by 283 nucleotidesQEN71_RS39120 and QEN71_RS39125 are separated by 551 nucleotides QEN71_RS39105: QEN71_RS39105 - LysR family transcriptional regulator, at 2,155,460 to 2,156,347 _RS39105 QEN71_RS39110: QEN71_RS39110 - DeoR/GlpR family DNA-binding transcription regulator, at 2,156,496 to 2,157,278 _RS39110 QEN71_RS39115: QEN71_RS39115 - MFS transporter, at 2,157,307 to 2,158,443 _RS39115 QEN71_RS39120: QEN71_RS39120 - hypothetical protein, at 2,158,727 to 2,159,011 _RS39120 QEN71_RS39125: QEN71_RS39125 - hypothetical protein, at 2,159,563 to 2,159,784 _RS39125
Group Condition QEN71_RS39105 QEN71_RS39110 QEN71_RS39115 QEN71_RS39120 QEN71_RS39125
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. -0.7 -0.4 +0.1
carbon source D,L-Malic Acid (C) -0.1 N.D. -0.3 -0.2 -0.2
motility Motility_outer_sample_with_outgrowth -0.1 N.D. -0.2 -0.4 -0.1
stress LB_noSalt with Zinc 0.5 mM -0.4 N.D. -0.3 -0.2 +0.1
carbon source L-Rhamnose (C) -0.2 N.D. -0.7 +0.1 +0.1
motility Motility_outer_sample_with_outgrowth -0.2 N.D. -0.3 +0.1 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 N.D. -0.3 -0.2 +0.1
coculture Psabiae_ML3b with MT80 -0.4 N.D. +0.3 -0.1 -0.1
stress LB_noSalt with Chloride 200 mM -0.0 N.D. -0.4 +0.3 -0.1
coculture Psabiae_ML3b with MT81 -0.4 N.D. +0.2 -0.1 +0.1
stress LB_noSalt with Chloride 200 mM +0.0 N.D. -0.5 +0.3 +0.0
carbon source L-Rhamnose (C) +0.2 N.D. -0.4 +0.1 +0.1
motility Motility_inner_sample +0.4 N.D. -0.1 -0.1 -0.1
motility Motility_inner_sample +0.4 N.D. +0.2 -0.4 -0.1
carbon source L-Aspartic Acid (C) -0.3 N.D. +0.2 +0.3 -0.1
carbon source L-Aspartic Acid (C) +0.3 N.D. -0.3 +0.2 -0.1
carbon source L-Glutamic (C) -0.3 N.D. +0.0 +0.5 +0.0
carbon source D-Glucose (C) +0.2 N.D. +0.2 -0.3 +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.2 N.D. -0.1 +0.5 +0.0
carbon source L-Leucine (C) +0.6 N.D. -0.4 +0.2 -0.1
carbon source Fumaric (C) -0.2 N.D. -0.1 +0.4 +0.2
carbon source succinate (C) +0.3 N.D. +0.3 -0.2 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. -0.3 +0.3 +0.1
stress LB_noSalt with Chloride 200 mM +0.2 N.D. -0.1 +0.4 -0.0
carbon source D,L-Lactate (C) -0.1 N.D. +0.1 +0.5 -0.1
supernatant Filtered_supernatant_MT81_in_LB +0.4 N.D. +0.0 +0.2 -0.1
carbon source D-Xylose (C) +0.2 N.D. -0.2 +0.4 +0.1
supernatant Filtered_supernatant_MT80_in_LB +0.1 N.D. +0.4 +0.2 -0.1
carbon source L-Leucine (C) +0.1 N.D. +0.3 +0.5 +0.1
carbon source L-Histidine (C) +0.2 N.D. +0.0 +0.6 +0.1
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