Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS38350 and QEN71_RS38355 overlap by 4 nucleotidesQEN71_RS38355 and QEN71_RS38360 are separated by 348 nucleotidesQEN71_RS38360 and QEN71_RS38365 are separated by 102 nucleotidesQEN71_RS38365 and QEN71_RS38370 are separated by 2 nucleotides QEN71_RS38350: QEN71_RS38350 - thioesterase family protein, at 1,988,732 to 1,989,229 _RS38350 QEN71_RS38355: QEN71_RS38355 - sensor histidine kinase, at 1,989,226 to 1,990,683 _RS38355 QEN71_RS38360: QEN71_RS38360 - transcriptional regulator NanR, at 1,991,032 to 1,991,736 _RS38360 QEN71_RS38365: QEN71_RS38365 - type II toxin-antitoxin system HipA family toxin, at 1,991,839 to 1,993,188 _RS38365 QEN71_RS38370: QEN71_RS38370 - helix-turn-helix domain-containing protein, at 1,993,191 to 1,993,454 _RS38370
Group Condition QEN71_RS38350 QEN71_RS38355 QEN71_RS38360 QEN71_RS38365 QEN71_RS38370
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.1 -0.4 -0.1 -4.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.6 -0.9 -0.1 -4.0
carbon source D-Sorbitol (C) -0.1 +0.1 -1.1 +0.0 -3.2
carbon source L-Rhamnose (C) -0.2 +0.0 -0.8 -0.0 -3.3
carbon source D-Sorbitol (C) -0.0 -0.0 -1.9 +0.1 -2.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.0 -0.3 +0.0 -3.8
carbon source L-Rhamnose (C) +0.0 +0.0 -0.8 -0.1 -2.9
carbon source L-Histidine (C) -0.2 +0.0 -0.4 -0.1 -3.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.3 -0.5 -0.2 -3.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.1 -0.4 -0.1 -2.3
carbon source D-Xylose (C) -0.0 +0.1 +0.6 -0.1 -3.1
carbon source L-Histidine (C) +0.0 +0.1 -0.4 -0.2 -2.1
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.0 -0.6 +0.0 -1.8
carbon source 2-Deoxy-D-Ribose (C) -0.0 -0.2 -0.9 -0.0 -1.2
carbon source L-Leucine (C) +0.0 +0.1 -0.5 -0.0 -1.8
carbon source D-Glucose (C) -0.2 +0.0 -0.6 -0.2 -1.3
carbon source D-Fructose (C) +0.0 +0.0 -0.6 -0.0 -1.6
carbon source L-Leucine (C) -0.1 +0.1 -0.5 -0.0 -1.2
carbon source D-Glucose (C) +0.1 -0.0 -0.6 +0.0 -1.1
carbon source L-Aspartic Acid (C) -0.1 -0.0 -0.1 -0.0 -1.4
motility Motility_inner_sample -0.0 +0.0 -0.2 -0.1 -1.3
motility Motility_inner_sample_with_outgrowth +0.1 -0.1 -0.0 -0.2 -1.3
supernatant Filtered_supernatant_MT80_in_LB -0.2 -0.1 +0.1 -0.1 -1.2
motility Motility_inner_sample_with_outgrowth -0.1 -0.0 +0.0 -0.1 -1.1
carbon source D,L-Lactate (C) -0.0 -0.0 -0.0 +0.0 -1.2
motility Motility_outer_sample_with_outgrowth +0.0 +0.0 -0.2 +0.0 -0.9
motility Motility_inner_sample -0.1 +0.1 -0.2 -0.1 -0.6
stress LB_noSalt with Cobalt chloride 0.25 mM +0.0 +0.1 +0.0 -0.0 -1.0
carbon source Fumaric (C) -0.0 +0.1 -0.2 +0.1 -0.7
stress LB_noSalt with Zinc 0.5 mM +0.2 +0.1 +0.1 -0.0 -0.8
remove
QEN71_RS38350
plot		 remove
QEN71_RS38355
plot		 remove
QEN71_RS38360		 remove
QEN71_RS38365
plot		 remove
QEN71_RS38370
plot