Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS38115 and QEN71_RS38120 overlap by 1 nucleotidesQEN71_RS38120 and QEN71_RS38125 overlap by 4 nucleotidesQEN71_RS38125 and QEN71_RS38130 are separated by 313 nucleotidesQEN71_RS38130 and QEN71_RS38135 are separated by 336 nucleotides QEN71_RS38115: QEN71_RS38115 - type III secretion system outer membrane ring subunit SctC, at 1,932,832 to 1,934,919 _RS38115 QEN71_RS38120: QEN71_RS38120 - type III secretion system export apparatus subunit SctS, at 1,934,919 to 1,935,197 _RS38120 QEN71_RS38125: QEN71_RS38125 - type III secretion system export apparatus subunit SctV, at 1,935,194 to 1,937,389 _RS38125 QEN71_RS38130: QEN71_RS38130 - autoinducer binding domain-containing protein, at 1,937,703 to 1,938,551 _RS38130 QEN71_RS38135: QEN71_RS38135 - autoinducer binding domain-containing protein, at 1,938,888 to 1,939,736 _RS38135
Group Condition QEN71_RS38115 QEN71_RS38120 QEN71_RS38125 QEN71_RS38130 QEN71_RS38135
stress LB_noSalt with Zinc 0.5 mM -0.1 N.D. -0.2 -0.1 +0.1
carbon source L-Histidine (C) -0.0 N.D. -0.2 +0.1 +0.3
motility Motility_outer_sample -0.0 N.D. -0.2 +0.1 +0.2
coculture Psabiae_ML3b with MT80 +0.1 N.D. -0.0 -0.2 +0.3
carbon source D,L-Lactate (C) +0.1 N.D. -0.1 -0.1 +0.3
carbon source D-Glucose (C) +0.1 N.D. -0.2 +0.0 +0.2
carbon source L-Rhamnose (C) +0.1 N.D. -0.1 +0.0 +0.2
stress LB_noSalt with Chloride 200 mM +0.0 N.D. -0.1 +0.0 +0.2
motility Motility_outer_sample_with_outgrowth -0.1 N.D. +0.2 +0.1 +0.1
stress LB_noSalt with Chloride 200 mM +0.0 N.D. -0.1 -0.0 +0.3
motility Motility_inner_sample +0.1 N.D. +0.1 -0.1 +0.2
carbon source L-Histidine (C) +0.0 N.D. -0.1 -0.0 +0.4
supernatant Filtered_supernatant_MT183_in_LB -0.0 N.D. -0.1 +0.2 +0.2
carbon source D,L-Malic Acid (C) +0.1 N.D. -0.0 +0.0 +0.3
carbon source D-Xylose (C) -0.0 N.D. +0.1 +0.2 +0.1
motility Motility_outer_sample_with_outgrowth +0.0 N.D. +0.2 -0.0 +0.1
motility Motility_inner_sample_with_outgrowth +0.1 N.D. +0.0 +0.1 +0.2
carbon source casaminos (C) +0.1 N.D. -0.0 +0.1 +0.2
carbon source D-Fructose (C) -0.0 N.D. +0.2 +0.1 +0.1
carbon source D,L-Lactate (C) +0.1 N.D. +0.0 +0.1 +0.2
carbon source D-Sorbitol (C) +0.0 N.D. -0.1 +0.2 +0.2
carbon source casaminos (C) +0.2 N.D. +0.1 +0.0 +0.2
carbon source D-Sorbitol (C) +0.1 N.D. +0.1 +0.0 +0.3
stress LB_noSalt with Chloride 200 mM +0.1 N.D. +0.0 +0.1 +0.3
motility Motility_inner_sample_with_outgrowth +0.0 N.D. +0.1 +0.2 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 N.D. +0.2 +0.2 +0.1
motility Motility_outer_sample +0.1 N.D. +0.3 +0.0 +0.1
carbon source L-Glutamic (C) +0.1 N.D. +0.1 +0.1 +0.2
motility Motility_outer_sample_with_outgrowth +0.2 N.D. +0.2 -0.0 +0.3
carbon source L-Leucine (C) +0.1 N.D. +0.1 +0.2 +0.3
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