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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS37625 and QEN71_RS37630 are separated by 74 nucleotides
QEN71_RS37630 and QEN71_RS37635 overlap by 4 nucleotides
QEN71_RS37635 and QEN71_RS37640 overlap by 43 nucleotides
QEN71_RS37640 and QEN71_RS37645 are separated by 108 nucleotides
QEN71_RS37625: QEN71_RS37625 - hypothetical protein, at 1,810,783 to 1,811,052
_RS37625
QEN71_RS37630: QEN71_RS37630 - DUF692 domain-containing protein, at 1,811,127 to 1,812,005
_RS37630
QEN71_RS37635: QEN71_RS37635 - DNA-binding domain-containing protein, at 1,812,002 to 1,812,754
_RS37635
QEN71_RS37640: QEN71_RS37640 - tautomerase family protein, at 1,812,712 to 1,812,861
_RS37640
QEN71_RS37645: QEN71_RS37645 - organic hydroperoxide resistance protein, at 1,812,970 to 1,813,395
_RS37645
Group
Condition
QEN71
_RS37625
QEN71
_RS37630
QEN71
_RS37635
QEN71
_RS37640
QEN71
_RS37645
motility
Motility_inner_sample
N.D.
-0.4
-0.7
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-0.4
-0.5
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.2
-0.6
N.D.
N.D.
carbon source
Fumaric (C)
N.D.
-0.2
-0.6
N.D.
N.D.
motility
Motility_inner_sample
N.D.
-0.7
-0.1
N.D.
N.D.
supernatant
Filtered_supernatant_MT71_in_LB
N.D.
-0.5
-0.2
N.D.
N.D.
carbon source
L-Aspartic Acid (C)
N.D.
-0.7
-0.1
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
N.D.
-0.1
-0.5
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
N.D.
-0.2
-0.2
N.D.
N.D.
carbon source
D-Sorbitol (C)
N.D.
+0.2
-0.6
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
N.D.
-0.1
-0.3
N.D.
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
N.D.
-0.3
-0.1
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-0.4
+0.1
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
+0.4
-0.7
N.D.
N.D.
carbon source
L-Rhamnose (C)
N.D.
+0.1
-0.4
N.D.
N.D.
carbon source
L-Glutamic (C)
N.D.
+0.3
-0.5
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
+0.1
-0.3
N.D.
N.D.
motility
Motility_inner_sample
N.D.
+0.1
-0.3
N.D.
N.D.
carbon source
succinate (C)
N.D.
+0.2
-0.3
N.D.
N.D.
carbon source
L-Leucine (C)
N.D.
+0.4
-0.4
N.D.
N.D.
carbon source
L-Histidine (C)
N.D.
+0.4
-0.3
N.D.
N.D.
carbon source
L-Leucine (C)
N.D.
+0.3
-0.1
N.D.
N.D.
carbon source
D-Fructose (C)
N.D.
+0.4
-0.2
N.D.
N.D.
carbon source
Fumaric (C)
N.D.
+0.4
-0.1
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
N.D.
+0.4
+0.0
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
+0.0
+0.4
N.D.
N.D.
supernatant
Filtered_supernatant_MT81_in_LB
N.D.
+0.3
+0.2
N.D.
N.D.
carbon source
casaminos (C)
N.D.
+0.2
+0.2
N.D.
N.D.
stress
LB_noSalt with Zinc 0.5 mM
N.D.
+0.4
+0.3
N.D.
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
N.D.
+0.4
+0.4
N.D.
N.D.
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