Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS37550 and QEN71_RS37555 are separated by 235 nucleotidesQEN71_RS37555 and QEN71_RS37560 are separated by 45 nucleotidesQEN71_RS37560 and QEN71_RS37565 are separated by 187 nucleotidesQEN71_RS37565 and QEN71_RS37570 are separated by 271 nucleotides QEN71_RS37550: QEN71_RS37550 - PAS domain S-box protein, at 1,798,922 to 1,801,138 _RS37550 QEN71_RS37555: QEN71_RS37555 - response regulator, at 1,801,374 to 1,801,757 _RS37555 QEN71_RS37560: QEN71_RS37560 - H-NS family nucleoid-associated regulatory protein, at 1,801,803 to 1,802,360 _RS37560 QEN71_RS37565: QEN71_RS37565 - PilZ domain-containing protein, at 1,802,548 to 1,803,474 _RS37565 QEN71_RS37570: QEN71_RS37570 - VOC family protein, at 1,803,746 to 1,804,171 _RS37570
Group Condition QEN71_RS37550 QEN71_RS37555 QEN71_RS37560 QEN71_RS37565 QEN71_RS37570
carbon source L-Histidine (C) -0.1 -6.1 -0.1 +0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -5.4 -0.2 +0.2 +0.1
carbon source D-Sorbitol (C) -0.1 -4.5 -0.2 +0.1 -0.4
carbon source D-Sorbitol (C) +0.1 -5.3 -0.1 +0.2 +0.6
carbon source L-Rhamnose (C) +0.0 -4.7 -0.0 +0.3 -0.0
carbon source L-Rhamnose (C) -0.0 -4.7 -0.1 +0.7 +0.1
carbon source D-Glucose (C) +0.0 -4.8 +0.1 +0.3 +0.3
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -4.0 +0.2 -0.2 +0.2
carbon source L-Leucine (C) +0.1 -3.3 -0.1 -0.0 -0.4
carbon source D-Xylose (C) +0.1 -4.3 -0.0 +0.4 +0.4
carbon source D-Glucose (C) +0.1 -3.7 +0.2 +0.4 +0.1
carbon source L-Leucine (C) +0.1 -3.6 +0.1 +0.2 +0.4
carbon source 2-Deoxy-D-Ribose (C) +0.2 -2.6 -0.1 -0.0 -0.2
carbon source D,L-Lactate (C) -0.1 -2.2 -0.1 -0.3 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.1 -2.7 -0.1 -0.2 +0.4
carbon source D-Fructose (C) +0.1 -3.3 -0.1 +0.3 +0.2
carbon source D-Fructose (C) +0.1 -3.3 +0.1 +0.6 +0.3
carbon source L-Histidine (C) -0.1 -3.0 -0.0 +0.3 +0.5
carbon source succinate (C) +0.2 -1.8 +0.0 +0.2 -0.6
carbon source Fumaric (C) -0.1 -2.3 +0.2 +0.3 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -2.0 +0.1 +0.8 -0.5
carbon source D,L-Lactate (C) +0.1 -1.5 +0.0 +0.1 -0.2
carbon source L-Aspartic Acid (C) +0.1 -1.2 -0.1 +0.1 -0.2
carbon source D,L-Malic Acid (C) +0.1 -1.2 -0.1 +0.3 -0.4
carbon source L-Aspartic Acid (C) -0.1 -1.0 -0.0 +0.3 -0.4
motility Motility_inner_sample +0.1 -0.9 +0.2 -0.4 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -1.5 -0.1 +0.0 +0.6
stress LB_noSalt with Cobalt chloride 0.25 mM -0.2 -0.9 +0.1 +0.4 +0.4
carbon source succinate (C) +0.0 -0.9 -0.2 +0.7 +0.4
motility Motility_outer_sample -0.0 -0.6 -0.2 +0.4 +0.6
remove
QEN71_RS37550
plot		 remove
QEN71_RS37555
plot		 remove
QEN71_RS37560		 remove
QEN71_RS37565
plot		 remove
QEN71_RS37570
plot